Hyaena hyaena (striped hyena): 120244884
Help
Entry
120244884 CDS
T07257
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120244884 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120244884 (XAB2)
03041 Spliceosome [BR:
hhv03041
]
120244884 (XAB2)
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120244884 (XAB2)
Spliceosome [BR:
hhv03041
]
Complex B
Other components
Prp19-related factors
120244884 (XAB2)
Complex C
120244884 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
TPR_15
ARM_TT21_C
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
120244884
NCBI-ProteinID:
XP_039107578
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPDRPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcccggccggatcggccggaccttgttttcgaggaagag
gacctcccctatgaggaggagatcatgcggaaccagttctcggtcaagtgctggctccgc
tacattgagttcaaacaaggtgccccgaagccgaggctcaatcagctgtatgagcgggcc
ctgaagctgctgccctgcagctacaaactctggtaccggtacctgaaggcgcgccgcgca
caggtgaagcatcgctgtgtgacggacccggcctacgaagacgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacgtctatggctagactactgccagttcctg
atggaccagggccgagtcactcatacccggcgcaccttcgaccgtgccctccgggccctg
cccattacgcagcactcgcgcatctggcccctgtacctgcgcttcctgcgctcgcacccg
ctccctgagaccgctgtgcggggctaccggcgcttcctcaagctgagccccgagagcgca
gaggagtacatcgagtatctcaagtccagcgaccggctggacgaagccgcgcagcgcctg
gccaccgtggtcaacgatgagcgctttgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctctgtgatctcatctcccagaacccagacaaagtgcagtcactcaacgtg
gacgccatcatccgtgggggcctaacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggccgactactacatccgcagtggccacttcgagaaggctcgagatgtgtacgag
gaggccatccggaccgtgatgaccgtgcgggacttcactcaggtgtttgacagctacgcc
cagtttgaggagagcatgatcgcagccaagatggagacagcctcagaactggggcgggag
gaggaagatgacgtggatctggagctgcgcctggcccgctttgagcagctcattggccgg
cggcccctgctcctcaacagtgtcctgctgcgccagaacccacaccatgtgcacgagtgg
cacaagcgtgtggccctgcatcaaggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacggtggaccctttcaaggctacaggcaagccccacaccctgtgggtcgca
ttcgccaagttttatgaggacaacgggcagctggatgacgctcgcgtcatcctagagaag
gccaccaaggtgagcttcaagcaggtggacgacctggcaagcgtgtggtgtgagtgtggc
gagctggagctccggcatgagaactacgaccaggctctgcggctgctgcggaaggccacc
gcactgcctgctcgccgcgccgagtactttgacggctcggagcccgtgcagaaccgtgtg
tacaagtccctgaaggtgtggtcgatgctcgccgacctagaggaaagcctgggtaccttc
cagtccaccaaggccgtgtacgaccgcatcctggatctgcgcatcgccacgccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tatgagcgtggtatctcgctgttcaagtggcccaacgtgtctgacatctggagcacctac
ctgaccaagttcatcgcccgctacgggggccgcaagctggagcgggcgcgggacctcttc
gagcaggcactggacggctgccctcccaaatacgcgaagacgctgtacctgctgtacgcc
cagctggaggaggagtggggcctggcccggcacgccatggcggtgtacgagcgcgccacg
cgggccgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgtgcggcc
gagatctacggggtcacccacacccgcagcatctaccagaaagccatcgaggtgctgtcg
gacgaacacgcccgggagatgtgtctgcggttcgccgacatggagtgcaagctgggcgag
atcgaccgggcgcgggccatctacagcttttgctcccagatctgcgacccccggaccact
ggcgctttctggcagacatggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcgcatccgccgcagtgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcaaatgctcaaagtgtccggcagcgccacgggcactgtgtccgacctggcc
cccgggcagagcggcatggatgacatgaagctgctggagcagcgggccgagcagctggcg
gccgaggccgagcgggaccagcccccgagggcccagagcaagatcctgtttgtgaggagc
gacgcgtcacgggaggagctggccgagctggcccagcaggccaaccccgaggagatcgag
ctgggggaggacgaggacgaggacgagatggacctggagcccaacgaggtgcggttggag
cagcagagcgtgccggccgctgtgttcgggagcctgaaggaggactga
DBGET
integrated database retrieval system
