KEGG   Hyaena hyaena (striped hyena): 120244945
Entry
120244945         CDS       T07257                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
hhv  Hyaena hyaena (striped hyena)
Pathway
hhv03030  DNA replication
hhv03410  Base excision repair
hhv03420  Nucleotide excision repair
hhv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hhv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120244945 (RFC5)
   03410 Base excision repair
    120244945 (RFC5)
   03420 Nucleotide excision repair
    120244945 (RFC5)
   03430 Mismatch repair
    120244945 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhv03032]
    120244945 (RFC5)
   03036 Chromosome and associated proteins [BR:hhv03036]
    120244945 (RFC5)
   03400 DNA repair and recombination proteins [BR:hhv03400]
    120244945 (RFC5)
DNA replication proteins [BR:hhv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120244945 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120244945 (RFC5)
Chromosome and associated proteins [BR:hhv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120244945 (RFC5)
DNA repair and recombination proteins [BR:hhv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120244945 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120244945 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 AAA_19 ATPase_2 AAA_30 PhoH TIP49 AAA_7 TniB DNAX_ATPase_lid nSTAND3 Thioredoxin_6 Mg_chelatase bpMoxR NPHP3_N AAA_25 AAA_3 ABC_tran AAA_28
Other DBs
NCBI-GeneID: 120244945
NCBI-ProteinID: XP_039108059
LinkDB
Position
Unknown
AA seq 340 aa
METSARQEQQQPAAAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPHLEHVAQEEKVDLSEDGLKAVVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTET
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagacctcagcgaggcaggagcagcagcagcccgcggcggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacgctgaatgatctgatttctcatcaggacatt
ttgagcaccattcagaaatttattagcgaagaccgactgccgcacctgcttctctatggg
cctccagggacgggaaagacctccaccatcctagcctgtgctaaacagctatacaaagat
aaggaatttggctccatggtcttggagctgaatgcttccgacgaccgaggaatagacatc
gttcggggaccaatcctgagcttcgctagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgatgccatgacccaagatgcccagaacgccttgaggaga
gtgattgagaaatttacagaaaataccaggttctgcctcatctgtaactatctgtcgaag
atcatccccgccttgcagtcccgctgcaccaggttccgattcggtcccctgaccccagaa
ctcatggtcccccacctggaacacgtcgcacaagaagagaaggtggacctaagcgaggac
gggctgaaagccgttgtgacgctttccagcggagacatgcgaagggctctgaacatcctg
cagagcaccaatatggcctttgggaaggtgacagaggagaccgtctacacctgcactggg
cacccgctcaagtcagacatcgccaacattctggactggatgttgaatcaggacttcacg
accgcctacaggaatattacagagttgaaaacgctgaaggggctggcgttacatgatatc
ctgacagagatacacttgtttgtgcacagagttgattttccatcttcagttcgagtacat
ttactgaccaaaatggcagacattgagtacagactttccgttggcaccaatgagaagatt
cagctgagttccctcattgccgctttccaggtcaccagggacctgatcgtcacggagacc
taa

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