Hyaena hyaena (striped hyena): 120246322
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Entry
120246322 CDS
T07257
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03030
DNA replication
hhv03420
Nucleotide excision repair
hhv03430
Mismatch repair
hhv03440
Homologous recombination
hhv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120246322 (RPA1)
03420 Nucleotide excision repair
120246322 (RPA1)
03430 Mismatch repair
120246322 (RPA1)
03440 Homologous recombination
120246322 (RPA1)
03460 Fanconi anemia pathway
120246322 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhv03000
]
120246322 (RPA1)
03032 DNA replication proteins [BR:
hhv03032
]
120246322 (RPA1)
03400 DNA repair and recombination proteins [BR:
hhv03400
]
120246322 (RPA1)
Transcription factors [BR:
hhv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120246322 (RPA1)
DNA replication proteins [BR:
hhv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120246322 (RPA1)
DNA repair and recombination proteins [BR:
hhv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120246322 (RPA1)
MMR (mismatch excision repair)
120246322 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120246322 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
120246322
NCBI-ProteinID:
XP_039109718
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEKEQLSSNCICQINRFIVNTLKDGRRVVILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPVSATSPPASKPQQQNGSSGMGPTSSKAYGASKIFGKAGGTSLANSSGGT
QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIGDLENKSKDSLIDIIGICKSYEDAIKITVKSNNREVSKRNLYLMDMSGKVVTTTL
WGEDADRFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVIMNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLRTGGTAGSNTNWKTLYEVKSENLGQGDKADYFSCVATVVFLRKENCMYQA
CPNQDCFKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFRENQWVTCFQECAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRTFAFKIRVKLETYNDESRIKATVMDAKPVDYR
EYGRRLIMNIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacaaggagatacatcc
ataaaacctgttctgcaagtcattaacatccgtcccatcactacagggaatagtccgccc
cgttatcgactgcttatgagtgatggattgaacactctgtcctctttcatgttggcaaca
cagttgaaccatctcgttgagaaagaacagctgtctagcaactgcatatgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggagttagac
attttgaaatcagctgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacacgggcagcagcaggtggtcccttctccggtctcagcaaccagtccgccagccagc
aagccccagcaacagaatgggagctcaggcatgggtcccacttcatctaaggcttacggt
gcctcaaagatatttggaaaagctgggggtaccagcctagcgaacagttctggaggaaca
caggtcaaggtggtacccatcgccagcctcaccccttaccaatccaagtggactatctgt
gctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
ctcttctccctggaactggttgatgaaagtggtgaaatcagggctaccgctttcaatgag
caagtggacaagtttttcccccttatcgacatgaacaaggtctattacatctctaaaggc
accctgaagattgccaacaaacagttcacagctgtgaaaaatgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatgggcatcacttaccaacagttcagttt
gatttcacagggattggtgacctggagaacaagtctaaagactctctgatagacataatc
gggatctgcaagagctatgaagatgccatcaaaatcacagtgaagtctaacaacagagag
gtttctaagagaaacctctacctgatggacatgtcagggaaagtggtgactactacactg
tggggagaagatgccgatagatttgatggctctagacaacctgtgatagccatcaaagga
gccagagtctctgactttggtggacgcagcctctccgtactgtcttcaagcacggtcatt
atgaatcctgacatcccagaggcctataagcttcgtggatggtttgactctgaaggacaa
gccttagatggtgtttccatctctgatctaaggactggaggaacagcagggagcaacacc
aactggaaaactctatatgaggttaaatcagagaacctgggccaaggtgacaaggcggac
tattttagctgtgtggcgacagtcgtgtttcttcgcaaagagaactgcatgtatcaagcc
tgcccaaaccaggactgctttaagaaagtgattgatcaacagaatggattgtaccgctgt
gagaagtgtgatagtgaatttcccaacttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcgagagaatcagtgggtcacctgcttccaggagtgtgcggaggccatcctc
ggacagaacactgcctatcttggggagttaaaagagaagaatgagcaagcatttgaggaa
gttttccagaatgccaacttccgaacttttgcattcaagatcagggtgaaactagagacc
tacaatgatgagtctcgaattaaggccactgtgatggatgcgaagcccgtggactacaga
gaatatggcagaaggctgatcatgaacatcaggagaaacgcactgatgtga
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integrated database retrieval system
