Hyaena hyaena (striped hyena): 120248663
Help
Entry
120248663 CDS
T07257
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
120248663 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhv04147
]
120248663 (COL18A1)
00535 Proteoglycans [BR:
hhv00535
]
120248663 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
hhv00536
]
120248663 (COL18A1)
Exosome [BR:
hhv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120248663 (COL18A1)
Proteoglycans [BR:
hhv00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120248663 (COL18A1)
Glycosaminoglycan binding proteins [BR:
hhv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120248663 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120248663
NCBI-ProteinID:
XP_039113025
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MARAPASRLGLLLLLTHGLVATRADLLGFNWLWSPRTSRPTGELVPALPGSPHAQPTEET
TTLAAPQDDPAGWGRAPASPGLPPGSLQAGPDGTSAAPTASTAGPDTKEENIAGVGAKIL
NVAQGIRSFVQLWDDTAPRDSSTTAETPAPVTPTAPPSPPWGDGTAPWLGSGAPTSPNTR
RTKAGTLPAPTQLSPSVGRPRAPLREPSVPPPAPGRASLSSAPGGAPPWGTQLSPGRPQD
LDGEGPSPEAARAGRLHRLADNRRRWPHLLPLVTGLLGAHAAPLALPSDPPALASPAPLP
AVSGDKGAWAPRSAASAGPGLANNSGQPGPRLPPPPPSLPACGHLGIGRSWLPSHLQHWS
REEVRAAARAWGRLLGTHCHRFLAGFFCLLLAPPPAPPPCRQFCEALEDACWSHLEAGGL
PGTCALLPAQEDGGCVFIGPGAENLGTEVGLLQLLGEPPPPQVTQVDDPDVGPAFVFGPD
ANSGQVARYHFPSPFFRDFSLLFHIRPATDAAGVLFAITDAAQALVSVGVKLTAVRDGHQ
HVQLLYTEPGAARTHTAASFRLPAFTGQWTRFALSVDGATAALFVDCELFQRVPLVRSPR
ALELEPGAGLLVAQAGGADPDKFQGTIAELRVRGDPRVSPLHCLEEDDDDSGGVSGDFGS
GQEGPEQPGPSPKPSLPEAPPVTSPPLAGGRNVEDSRTEEIEEEATMSSLGAWTLPGSDS
VTAWNVQSPGGSLEEAPAGPAVQNPDAQPVPGPQGPPGPPGPPGKDGVPGKDGEPGGPGE
DGILXGDPGPQGFPGTPGDVGPKGEKGDPGAGPRGPPGPQGPPGPPGPSFRHDRLTFIDM
EGSGFAGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGRDGAP
GLPGAQGPPGPPGRDGGPGNTGQKGSPGEAGAPGPKGSKGDPGPTGAPGETGLAGAPGPA
GPPGPPGPPGPPGPGLAAGFDDMEGSGGPFWSTAHGASGPQGPPGPPGVKGDPGIGGPQG
AKGEVGADGPPGFPGLPGREGAAGAQGPKGEKGAQGEKGDPGRDGVGQPGLPGPPGPPGP
VVYVSEQDGAVAGVPGPEGRRGYAGFPGPAGPKGDVGSKGQRGPPGPKGEKGEPGPVFSP
DGHTLGPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGPASV
SLGVRGPPGPPGPPGPPGPPGTPVYDSNAFMEAGHPGPPGLPEYQGPPGPKGDKGEVGPA
GPPGQFPLDLLQLEAEMKGEKGDRGETGQKGERGEPGSGRFFSSSVPGPPGPPGDPGIPG
PKGESIRGQPGPPGPQGPPGIGHEGRQGPPGPPGPPGPPGPPSFPGPYRQTISVPGPPGP
PGPPGPPGTMGTSSGVRIWATYQTMLDQVPEVPEGWLIFVAETEELYVRVRNGFRKVLLE
ARTPLPRGTVRTQPSSGLGARRTSGWGSMVAGHTCPHVPGTPGGRWGPGAWDAVCRPQAT
SFRATLSTPPGVLGAGMGPSGGMAQPTNSRIRVSHCSGSSKPRLLKWPGTQAALGSVCPG
LPVSPPTHGAQGVLPSLPPPSPPPPPPYARHRCRRGGTREAPAPRRSRAGGRWERVPGPG
DQAETEHAAWQKLHLAALNSPQPGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDL
SSIVRRADRTGVPVVNLRDEVLFPSWEALLSGSGGALQPGARILSFDGRDVLQHPAWPQK
SVWHGSDPSGRRLTDSYCETWRTEDAGATGQASSLLAGRLLAQKAASCRNALIVLCIENS
FMTSSSK
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgccccggccagccgcctgggcctgctgctgctgctcacccatggcctcgtg
gccaccagggccgacctactgggattcaactggctgtggtcccctaggacctccaggccc
acaggggaactggtccccgcgctcccgggcagcccacacgcgcagcccacggaggagacc
accacgctcgcggccccccaggatgaccccgcagggtggggcagggcccctgccagccct
gggctgcccccggggagcctgcaggccggcccggacgggacttccgctgcacccactgcc
tccaccgcaggcccggacacgaaggaggagaacatcgccggcgtcggagccaagatcctg
aacgtggcccagggcatccggagcttcgtccagctgtgggatgacaccgctcccagagac
agctccacgacggcagagacgccggcccctgtgacccccacggccccccccagccccccc
tggggggacgggaccgctccctggctgggcagtggggccccgacctctcccaacacccgg
aggaccaaggccggcaccctgccagcacccacccagctgtctccctccgtgggcaggccc
cgggcaccgctcagggagccctcggtgccgccacctgctccaggtagagcctctctctcc
tctgcgccgggcggggcccctccctgggggacccagctgtccccggggcggccccaggat
ctggacggcgaaggaccctcccccgaggcggcccgggccggccggctgcaccgactcgct
gacaaccgcaggcgctggccgcatctgcttccgctggtgacgggtctcctgggtgcccac
gccgcccccttggctctgccctctgacccccccgccctggcgtctccggccccactccca
gctgtcagcggggacaagggtgcttgggctcctcgctcggctgcctctgcggggccgggg
ctcgctaacaactccgggcagcctgggccccgcctgccgccgccgccgccctccctgccc
gcgtgcggccacctgggaatcgggcgctcctggctgcccagccacctccagcactggagc
cgcgaggaggtgcgggccgccgcccgggcctgggggcgcctcctcgggacgcactgccac
cgcttcctcgccgggttcttctgcctgctgctggccccgccccccgccccccccccctgc
cgccagttctgcgaggccctggaggacgcgtgctggagccacctggaggcgggcgggctg
ccgggcacctgcgccttgctcccggcccaggaggacgggggctgcgtgttcattgggccg
ggcgcagagaacctgggcacggaggtggggctcctgcagctgctgggagagccgccgccg
ccccaggtgacccaggtggatgaccccgacgtcgggccggccttcgtcttcggcccggac
gccaacagcggccaggtggcccggtaccacttccccagcccgttcttccgcgacttctcc
ctgctcttccacatccggcccgccaccgacgctgcgggggtgctgtttgccatcacggac
gcggcccaggcgctggtctccgtgggcgtgaagctgacggccgtgcgtgacgggcaccag
catgtccagctcctgtacaccgagcctggcgccgcccgcacccacacggccgccagcttc
cgcctgcccgccttcaccggccagtggacgcgcttcgcgctcagcgtggatggcgccacc
gcggcactgttcgtggactgcgagctgttccagagggtgcccttggtgcgctccccgcgg
gccctggagctggaacccggcgccggcctcctcgtggcccaggctggaggagcggacccc
gacaagttccaggggacgattgcggagctgagggtgcgcggggacccccgggtgagcccc
ctgcactgtctggaagaggacgacgacgacagcggtggggtgtccggagacttcggcagc
gggcaggagggcccggagcagccgggtccgtccccaaagcccagcctccccgaggctcca
ccggtcacttctccgcccttggctggaggcaggaacgtggaagattccagaactgaagaa
attgaggaagaagccacaatgtcttcactgggagcttggaccctccctggctcagactct
gtcaccgcttggaacgttcagagccctgggggcagcctggaagaggctcctgcgggccct
gcagtgcagaaccccgatgcacagcctgtacccggcccacagggccccccaggaccccca
gggccaccggggaaggatggtgtccccggaaaggacggtgagccgggtggtcccggggaa
gacgggatcctgtaaggtgaccctgggccgcagggcttccccgggacccccggagacgtg
ggccccaagggcgagaagggggaccctggggccgggccaagaggacccccaggaccccaa
gggcctccggggccaccaggaccctccttcagacacgacaggctgaccttcattgacatg
gaggggtccgggtttgccggtgacctggagagcctccgaggcccgagaggcttccccggc
cccccagggccccctggcgtcccaggcctgcccggagagccaggccgcttcggggtgaac
agctcggacgtcccaggccctgcgggcctccctggcgtgcctgggcgggacggggccccc
gggcttcctggggcccagggaccgccgggtcctccaggaagagacggggggccgggaaac
actggccagaaaggcagccccggcgaagcgggcgccccgggacctaagggaagcaagggg
gaccctggccccacgggtgctcctggggagaccggcctggcaggagcccccggaccagct
ggcccccccgggcctcccgggccccccgggcccccaggaccaggactcgccgcagggttt
gatgacatggaaggctctgggggacccttctggtcaactgctcacggagccagtgggcca
cagggaccgccaggcccgccgggagtcaagggggaccctggcataggcggaccacagggc
gccaagggagaagtcggagcggatggacctcccgggttccccggcctccctggcagagag
ggcgcagccggggcccagggacccaaaggagaaaaaggggcccagggagagaaaggcgac
ccagggagggatggcgtggggcagcccggcctccccggaccccccggaccccccgggcct
gtcgtctatgtgtcggagcaggacggagccgtggcaggcgtgccgggacccgagggccgg
cgggggtacgcgggctttcctggaccggccgggccaaagggagatgtgggctccaaaggc
cagcggggccccccgggacccaagggtgagaagggcgagccgggccccgtcttcagccct
gatggccacacgctgggccccgcccagaaaggagccaagggagagcctggcttccgagga
ccgccgggtccatatggacggccggggcacaaaggggagattggcttccctgggcggccg
ggccgccccgggatgaacggactgaaaggggagaaaggagagccaggacccgccagcgtc
agcttgggtgtgaggggtccgcccgggcccccagggcccccaggccccccaggccctccg
gggactccggtttacgacagcaacgcattcatggaggctggccaccccggacctccggga
ttgccagagtaccagggccctcctggaccgaagggagacaaaggagaagtgggcccagcc
ggaccaccagggcagttcccactcgacctactccagctggaggccgagatgaagggggag
aagggcgacagaggagagacggggcagaagggcgagcggggtgagcccgggagtggcaga
ttcttcagctcgagtgtgcccggcccccccggcccgccaggcgaccctgggattccgggt
cccaagggagagagcattcggggccagccaggcccacccggacctcagggaccccctggc
atcggccatgaggggcgtcaggggcctcctgggccccccgggccccctggccccccgggg
cccccttccttccccggcccttacaggcagacgatcagtgttcctggccccccaggcccc
cctgggccccctggaccccctggaaccatgggcacctcctcaggggtaaggatctgggcc
acgtaccagaccatgctggaccaggtgccggaggtaccagagggctggctcatcttcgtg
gccgagacggaggagctgtacgtccgggttcggaatgggttccggaaggtgttgctggag
gcgcggacgcccctcccacgcgggacggtaaggacgcagccgagttcagggcttggagcc
cggaggacctcgggctggggctcgatggtggcgggtcacacgtgccctcacgtccctggc
acaccggggggacgctgggggcctggggcatgggatgcggtgtgcagaccacaagccacc
tcctttcgggccacgctgtccacccctcctggagtgctgggcgcagggatgggcccctct
ggggggatggcgcagcccacaaattcacggattcgggtttcccactgctctggctcctcc
aagccccggcttctcaagtggcctgggacccaggctgcgttaggaagtgtgtgtcctggg
ctccccgtgagtccacccacacatggagcccagggagtcctcccttccctccctcctccc
tcccccccccccccccccccgtatgccaggcaccgttgcaggcggggagggactcgcgag
gcccctgccccgcggcgctcacgggctgggggaaggtgggaacgggtgcctgggcccggg
gaccaggcagagacagagcacgcggcgtggcagaagctccacctggcggcactcaacagc
ccccagccgggcggcatgcgcggcatccgcggcgcggacttccagtgcttccagcaggcg
cgcgccgtggggctggcgggcaccttccgcgccttcctgtcctcgcggctgcaggacctc
tccagcatcgtgcgccgcgccgaccgcacgggcgtgcccgtcgttaacctcagggacgag
gtgctgttccccagctgggaggccttgttgtccggctcggggggcgcgctgcagcccggc
gcccgcatcctgtccttcgacggcagggacgtcctgcagcaccctgcctggccccagaag
agcgtgtggcacggctcggaccccagcgggcgccgcctgaccgacagctactgcgagacg
tggcggacggaggacgcgggggccactggccaggcgtcctcactgctggcgggcaggctg
ctggcgcagaaagccgcgagctgccgcaacgccctcatcgtgctctgcatcgagaacagc
ttcatgacctcctcctccaagtag
DBGET
integrated database retrieval system
