Hathewaya histolytica: NCTC503_00444
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Entry
NCTC503_00444 CDS
T05971
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03030
DNA replication
hhw03430
Mismatch repair
hhw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC503_00444 (dnaE)
03430 Mismatch repair
NCTC503_00444 (dnaE)
03440 Homologous recombination
NCTC503_00444 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhw03032
]
NCTC503_00444 (dnaE)
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_00444 (dnaE)
Enzymes [BR:
hhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC503_00444 (dnaE)
DNA replication proteins [BR:
hhw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC503_00444 (dnaE)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC503_00444 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Secretin
Csm1_B
HHH_3
Motif
Other DBs
NCBI-ProteinID:
VTQ83914
UniProt:
A0A4U9QYE7
LinkDB
All DBs
Position
1:459121..462651
Genome browser
AA seq
1176 aa
AA seq
DB search
MENLEQVCEKREKEDLGEFVHLHTHTEYSLLDGSGKISRIIQKTKELGMKAISITDHGSM
FGCVQFYKEAKANGIKPIIGCEIYIVPKSMYIKNPDRENETYHLVLLVKNERGYENLMKI
VSKASLEGFYYKPRIDHDYLKEHSEGLVATSACLGGEVQKNLLNGNIGKAKEAALFYKEV
FKEDFYLELQYHGVQDQLKVNEMLVKLSKEIDVPLVCTNDVHYINKEDWKAHDILLCIQT
GKTVEEENRMRYPSKEFYLKSVEEMKENFAYIPEALENTVKIAEKCNFDYEFHKSKLPKF
PLDEGIDSYEYLRNLCYMGLKERYSDINDQLKERLEYELNIIKQMGYIDYFLIVWDFIRY
ATESGIMTGPGRGSGAGSMVAYTLGITKIDPIKYNLIFERFLNPERISMPDIDSDFCYER
RGEVIDYVVDKYGKENVSQIITFGTMAPRACIRDVGRAMNYSYSEVDRIAKMIPTVLNIT
IDKALELNPELKNVYEEEERVKELIDVARSLEGLPRHTSTHAAGVVIASKPLVSYVPLFK
NDESIVAQFDMNTLEELGLLKMDFLGLRTLTVIRDTVDIIKNTKGIEIDIDNIDYDDKKV
YDMIGEGKTVGVFQLESPGMTSFMKELKPDSLEDIIAGISLYRPGPMAEIPRYLKNKREP
ENINYDTPELENILDVTYGCMVYQEQVMQIVRDLAGYSMGRSDLVRRAMSKKKHKVMEEE
RKNFIYGIVDENGDTIVPGCIKNGISESVANKIYDSMMDFASYAFNKSHAAAYAVVGYQT
AYLMRYYPTEYIAAMLNSFMGNNDKASFYIKFAEKLGIQVLPPDINKSYSKFTVDNGCIR
FGMSAIKNIGINVVENIVRARNEKGEFLDLMDFCNKMDPSAINKRAVESLIKAGAFGKFG
VFRSQLLSIYEKVLDGVSNEKKRNIDGQISLFESSSETYNNIKIEYPNIREFEKKHLLMM
EKEMTGIYLSGHPLEEYEESLNLYTNTKISDISVEAKSLEEDFSEIESILRVKDGDRVII
GGIISSANKKVTRNNDFMAFINVEDMESSVECIVFPKSFNRYRDLIEEDNLVIIKGRISI
KEEEEPKVICEDIQPLLKVNNDKIYILVENQEEVKDTIRQFRQELNIYLGNTPIYLCTKN
DRKKFIIDKNLWVNGEIEVLNYLKNKFGESNVKVLS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttagaacaggtatgtgagaaacgtgaaaaggaagatttaggggagtttgtt
cacttacatactcatacggagtatagtcttttggatgggtcaggaaaaatatcaagaata
attcaaaagactaaggaacttggtatgaaggccatttcaataacagatcatggttctatg
tttggatgtgttcagttttacaaagaagctaaagccaacgggataaagcctattataggg
tgtgagatatacatagttccaaagtctatgtacattaaaaatccagacagagaaaatgaa
acctatcatctagttctactagttaaaaatgaacggggttatgaaaacttaatgaaaata
gttagtaaggcatctttggaagggttctactacaagcctagaatagatcatgattattta
aaagaacatagtgaagggttagtagcaactagtgcttgtctaggtggagaagttcagaag
aatttacttaatggaaacataggtaaagctaaagaagcagccttattttataaagaagta
tttaaggaagatttctatttagaacttcaatatcatggtgttcaagatcaacttaaagta
aatgaaatgttagttaaactttcaaaagaaatagatgttcctctagtatgtacaaatgac
gttcattacataaataaagaagactggaaggctcatgatatactcttatgtattcaaaca
ggaaaaaccgtagaagaagaaaatagaatgagatatccatcaaaagagttttatttaaaa
tcagtagaagaaatgaaggagaattttgcatacattcctgaagctctagaaaatacagtt
aaaatagcagagaagtgtaatttcgattatgaattccataaatcaaaactccctaagttt
ccattagatgaagggatagactcctatgaatatttaaggaatctatgctacatgggactt
aaagagagatatagtgatattaatgatcaattaaaagagagattagaatacgaacttaat
ataataaagcaaatgggatatatagactatttccttatagtttgggattttataagatat
gctacagaaagcgggatcatgacgggcccgggaagagggtcaggtgccgggtctatggtt
gcatataccttaggaataacaaaaatagatcctattaagtataaccttatatttgaaagg
tttttaaacccagagagaatatctatgccagatatagatagtgacttctgttatgaaaga
agaggggaggttatagattatgtagttgataagtatggcaaggagaatgtatcacaaatt
ataacctttggaaccatggcacctagagcttgcataagggacgttggaagggctatgaat
tattcttactcagaagtagatagaatagctaagatgattcctacagtacttaatataact
attgataaagcattggaactaaatccggaacttaagaatgtttatgaagaagaggaaagg
gtgaaagaactaatagatgttgctcgttctcttgaagggttaccaagacatacctcaact
catgcagctggagttgttatagcttcaaaacctttagtaagttatgttccattatttaaa
aatgatgagtctatagttgcacagtttgatatgaataccttggaggaacttggacttcta
aagatggattttctgggcttaagaacacttacggttattagggatactgtggatataata
aaaaataccaagggtattgaaattgatatagataatattgactatgacgataaaaaggtt
tatgacatgattggagaaggaaaaacagtaggagtttttcagctagagtctccgggaatg
actagttttatgaaggagttaaagccagatagcctagaggatataatagctggaataagc
ctttacagaccaggtcctatggctgaaattccaagatatttaaaaaataaaagagaacct
gaaaatataaattatgatactccagaacttgaaaatattttagatgttacttatggatgt
atggtttatcaagagcaagttatgcaaatagtaagagatcttgctggatattccatgggt
agaagtgaccttgtacgtcgtgccatgtcaaagaaaaaacataaggtcatggaagaagag
agaaagaactttatatatggaattgtagatgaaaatggtgacactatagttccagggtgt
atcaaaaatggaataagtgaaagcgtggcaaataaaatatatgattccatgatggatttt
gcatcatatgcttttaataaatcccatgctgcagcttatgctgtggtaggatatcagaca
gcttatttaatgagatactacccaacagaatatatagcagctatgctaaatagttttatg
gggaataacgataaagcttctttttatataaaatttgcagagaagctaggaatacaggta
ttaccaccagatataaataaaagttattcaaaatttactgtggataatggttgtatacgt
tttggtatgtcagctattaaaaatatagggataaatgtagtagaaaatatagtaagagct
agaaatgaaaaaggtgaattcttagatcttatggatttttgtaataagatggatccatca
gctataaataaaagagcagttgaaagtcttattaaggctggagcttttggtaaatttgga
gtatttagatctcaattattatctatatatgagaaggtgttagatggtgtatctaatgaa
aaaaagagaaatatagacggacagataagcttatttgaatcatcatctgaaacttataat
aatattaaaattgagtatcctaatattagagaatttgaaaaaaaacatttattaatgatg
gaaaaagaaatgacaggtatatatctatcaggacatcctcttgaggagtatgaagaaagt
ttaaatttatatactaacactaagatttcagatatttcagtggaagctaagagtttagaa
gaagattttagtgaaatagaaagcatactaagagttaaggatggggatagagtaatcata
ggtggaattatatccagtgcaaacaaaaaggttactaggaacaatgattttatggcgttt
ataaatgtagaggatatggaatctagtgtagaatgtatagttttccctaaaagttttaat
agatatagagatttaatcgaagaagataatttggtgattataaagggaagaattagtata
aaggaagaggaagaacctaaggttatatgtgaggacatccagcctctattaaaggtaaat
aacgataagatatatatacttgtagaaaatcaggaagaagttaaagataccataagacaa
tttagacaagaattaaatatatatttagggaatacacccatatatctttgcacaaaaaat
gatagaaagaaatttataattgacaagaacctttgggttaatggagagatagaagtactg
aattatttaaaaaataaattcggagaaagtaatgttaaagtcctaagctaa
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