Hathewaya histolytica: NCTC503_00448
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Entry
NCTC503_00448 CDS
T05971
Symbol
rumA_1
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hhw
Hathewaya histolytica
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhw03009
]
NCTC503_00448 (rumA_1)
Enzymes [BR:
hhw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC503_00448 (rumA_1)
Ribosome biogenesis [BR:
hhw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC503_00448 (rumA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Cons_hypoth95
Methyltransf_25
Methyltransf_15
PrmA
MTS
TRM5-TYW2_MTfase
Methyltransf_11
Ubie_methyltran
Methyltransf_4
PCMT
Methyltransf_12
N6_N4_Mtase
FtsJ
RrnaAD
TPMT
Methyltransf_32
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
VTQ83936
UniProt:
A0A4U9QYV9
LinkDB
All DBs
Position
1:466413..467792
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AA seq
459 aa
AA seq
DB search
MKDITPVVKNKEYELDIESMGFQGEGVAKIDNFTVFVPDAILGEKVRIKILKVEKKFAFG
KLLQIIKSSPSRKVPKCGIYERCGGCNIQHMSYEGQLEYKKNRVMDTITRIGKVNGVIIH
HTIGMEEPYSYRNKVQLPVGKSSNPNNPVSIGFYAQRSHNIIDMNICHIQDEVADMVIKL
TRRWMKKYNIEPYNEEEDTGLVKHIMVRKGFTTGEVMVVLVTKETELPNSEEFTKTILQN
IEGVKSVVQNINPKKTNVILGRKNKTLWGSSYITDYIGEFKFNISPLSFFQINPVQTEKL
YDKALEYAALTGEETVFDAYCGTGTISLFLSKKAKKVYGVEIVEDAIKDAIKNAKQNKVE
NVEFLVGESEKEIPALIEKGIKPDVVLVDPPRKGCHIDLLKAIVKASPKRIVYVSCDPAT
LARDLGELQKMGYKTIEIQPVDMFPQTAHIESVALVERS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatataacgccagtagttaaaaataaggagtatgaattagacatagaaagcatg
ggttttcaaggtgaaggggtagcaaaaatagataattttactgtttttgttccagatgct
atattgggagaaaaggtaagaataaaaatattaaaggtagaaaagaagtttgcatttggt
aaattgttacaaataataaaaagttctccttcaagaaaagttcctaagtgtggaatttat
gaacgttgtggagggtgtaatattcaacatatgtcttatgaaggacaacttgaatataag
aaaaatagagttatggatacaataactcgcataggaaaagtaaatggagtaataattcat
catacaataggtatggaagaaccttattcatatagaaataaagttcagttaccagtaggg
aaaagtagtaatccaaacaacccagtatctatagggttttatgcacaaagaagccataat
atcatagatatgaacatatgtcatatacaagatgaagtagctgacatggttattaaactt
acaagaagatggatgaaaaaatataatatagaaccttataatgaagaggaagatacagga
cttgtaaaacacataatggtaagaaagggtttcacaacaggagaagtaatggtagttcta
gtaactaaagaaacagaacttccaaatagcgaggaatttacaaaaactatattacaaaac
attgaaggggtaaaaagtgtagttcaaaacataaaccctaaaaagaccaatgtaatttta
ggtaggaaaaacaaaaccctatggggtagttcatatataactgattatataggagaattt
aaatttaatatatcaccactatcattcttccaaataaaccctgtgcaaacagagaagtta
tatgataaggccctagaatatgcagctcttacaggtgaagaaacagtatttgatgcgtat
tgtggaacaggaactatatcattattcctttctaaaaaagctaaaaaagtctatggtgta
gaaatagtagaagacgctataaaagatgctataaaaaatgctaagcaaaacaaagtagaa
aatgtagaattcctagttggggaatcagaaaaagagataccagcacttatagaaaaaggt
ataaaacctgatgtggtattagtagaccctccaagaaagggatgtcacatagacttgctt
aaggcaatagtaaaagcatctccaaagagaatagtatacgtatcttgtgatccagctacc
ctagcaagggacctaggagaactgcaaaaaatgggctataaaacgattgaaatacaacca
gtagatatgttcccacaaacagctcatattgagagtgttgctttagtagagagaagttaa
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