Hathewaya histolytica: NCTC503_00621
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Entry
NCTC503_00621 CDS
T05971
Symbol
helD_1
Name
(GenBank) ATP-dependent DNA helicase rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03420
Nucleotide excision repair
hhw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC503_00621 (helD_1)
03430 Mismatch repair
NCTC503_00621 (helD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_00621 (helD_1)
Enzymes [BR:
hhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC503_00621 (helD_1)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC503_00621 (helD_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC503_00621 (helD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
Viral_helicase1
DEAD
PhoH
AAA_30
UvrD_C_2
ResIII
NACHT
DUF929
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VTQ84828
UniProt:
A0A4U9R2Q7
LinkDB
All DBs
Position
1:654213..656360
Genome browser
AA seq
715 aa
AA seq
DB search
MDHIKKDRDKELEKEIELEIEKERLNYVLTVINNEIELAVNKRKGFLGQLLEYRKKFIEE
YRNDEDKVIEYFDHERFVTEEAFNLIDKKLKELTTLKESPYFGRIDFREEEYGIEKIYVG
KFGLIKEGEFEPLVVDWRAPIASLFYEGKVGSSHYNSPDGEVPVEILGRVQYIIKNSKLL
GMFNSDLDVKDDILQMVLSKNSSDKLKDIVMTIQKEQDEIIRESYLKTLVVNGVAGSGKT
TIALHRVAYLLYNNRKKLENKILILGPNGIFMDYISNVLPSLGETGVKQDTFWDMTEKLL
DLQGKVMNYKEYFERIIKGDSELVDDFILKSSDEYIKRLNATIENLEQFKFKPTNVTFRG
KDIFKVDEIEELFSKHYKYMPLYKRTEKIRRIIIWRLKDKRDEEVREINKLYDTKRDSLS
PEELALNENDLEFQRKNCIRDVIKEFTEVKRSLVWLENEEVVSLYNRFNNYKKLTPEDLA
AIMYLKIKLEGYKIKEDIKHVVIDEAQDLSMLQLRVIKEITGASAFTILGDSNQRILPLK
GNIAMKNLDNIYKDLDIKYFSLDKSYRSTVEIMEYANTFLDEEKIVPLVRNGEEVWQRDV
ASDDVIQKCVVDRIFRYKESGYESIAIICEDINTCSKVHNLIKDKVHSRLLDSDELIYKS
GVVIIPSYFARGLEFDGVVLLMKDEKEESNYVNKGKLKYIMATRALHKLSVIKIK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatcatataaaaaaagatagagataaagagttagaaaaagaaatagaattagagata
gagaaggaaagacttaattatgtattaactgtaattaataatgaaatagagttagcagta
aataaaagaaaaggattccttggtcaattattagagtatagaaaaaagtttatagaagag
tataggaatgacgaagataaggtaattgagtattttgatcatgagcgatttgtgacagag
gaagcatttaatcttatagataaaaagttaaaagaacttactacattaaaagaaagtcct
tatttcggtagaatagattttagggaagaagagtatggcatagaaaaaatatatgttggt
aaatttggtcttattaaagaaggagaatttgaacctttagtagtagactggagagcacca
atagcttctttattttatgagggaaaagtaggttcatcacattataattctccagatggt
gaagtgccagtagaaatactaggaagagttcaatatataattaaaaattctaaattattg
ggaatgtttaattcggacttagatgtaaaagatgatatacttcaaatggtattatcaaaa
aattctagtgacaagttaaaagatatagtaatgacaatacaaaaagaacaggatgaaata
ataagggagtcttatttaaaaactcttgttgtaaatggtgtagcaggaagtggtaaaact
actatagcccttcatagagttgcataccttttatacaataatagaaaaaaattagaaaat
aaaattttgattttgggaccaaatggaatttttatggattatatatcaaatgtgcttccg
agtctaggtgagactggagtaaaacaggatactttttgggacatgacagaaaaactttta
gaccttcaaggaaaggttatgaactacaaagagtattttgaaagaataataaaaggtgat
agtgaattagtagatgattttattttaaaaagttcagacgagtatataaaaagactaaac
gctactatagaaaatttagaacaatttaaatttaaacctacaaatgttacttttagaggc
aaagatatttttaaagtagatgagatagaagaattatttagtaaacattataaatatatg
cctctatataagagaacagaaaaaattagaagaatcataatttggagattaaaagataag
agagatgaggaagtaagagaaataaataaattatatgatacaaagagagattccttatca
ccagaagaattagcacttaatgaaaatgatttagaattccaaagaaaaaattgtataaga
gatgttattaaagaatttacagaagtaaagagatctcttgtatggctggaaaatgaggaa
gtagtttctttatataatagatttaataattataaaaagcttacacctgaagatttagca
gctattatgtatctaaaaataaaattagaaggatataaaatcaaagaagatataaagcat
gtagtaatagatgaggcacaggatttaagcatgcttcagttacgagttattaaagaaata
acaggtgcatctgcatttaccatacttggcgatagtaatcaaagaattttacctttaaag
ggtaatatagctatgaaaaatttagataacatatataaagacttggatataaaatatttt
agtttagataagagttataggtctactgtagagattatggagtatgctaatacattctta
gatgaagaaaagatagttcctcttgttagaaatggagaggaagtctggcagcgagatgta
gcgtctgatgatgttatacagaagtgtgtagtagatagaatctttagatataaagaaagt
ggatatgagagtattgctataatatgcgaagatataaatacatgtagtaaagttcataat
cttattaaggataaggttcattcaaggttactagatagtgatgaattaatatataaaagt
ggggtagttataataccttcttattttgcacgaggactagaatttgatggagtagtttta
ctcatgaaagatgaaaaagaagaaagtaattatgtaaataaaggaaagcttaagtatatt
atggcaaccagggctttacataaattatctgtgattaaaattaaatag
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