Hathewaya histolytica: NCTC503_01074
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Entry
NCTC503_01074 CDS
T05971
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03030
DNA replication
hhw03410
Base excision repair
hhw03420
Nucleotide excision repair
hhw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC503_01074 (polA)
03410 Base excision repair
NCTC503_01074 (polA)
03420 Nucleotide excision repair
NCTC503_01074 (polA)
03440 Homologous recombination
NCTC503_01074 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhw03032
]
NCTC503_01074 (polA)
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_01074 (polA)
Enzymes [BR:
hhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC503_01074 (polA)
DNA replication proteins [BR:
hhw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC503_01074 (polA)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC503_01074 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC503_01074 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
XPG_I
Motif
Other DBs
NCBI-ProteinID:
VTQ87385
UniProt:
A0A4U9R7D9
LinkDB
All DBs
Position
1:1099302..1101956
Genome browser
AA seq
884 aa
AA seq
DB search
MDREKLVVLDGNSLMYRAFFAMPDLTNSEGLHTNAIYGFINMLLKIKSEFKPDHIVATFD
KKAPTFRHKEYDEYKAGRKKMPEELREQTPFLREFLQKYAVNIFEIDGYEADDLIGTLSV
YAEENNMEVYIVTGDRDALQLATDNVKIVINKKGISEIEVYDRERIIKDMGVTPKEFIDV
KGLMGDKSDNIKGVPGIGEKTAYKLIKEYKSIENLLLNIENISGKKVKENLMEYREQAIL
SKRLATIITSVPIEINLDEIRSKSDLDLKGIEELFSRLQFKSLIKKLPEISDIPMQSEQS
EKQEESGNKHRELLDLTKYNIKLIDTYKDLDSLNLSGEVYFIYSMENENILSKMEMTSVT
ILNGNNIYSINYKDIKEEAGEKAKDLLKVLCSDKVKLIGHGVKSFYTFIRKNNLDPKTVD
FDTEIAAYLIDPGKKGYELKSLQESLFHVNFEEQEELFKIVYLKELYNVFKERILELDMK
ELFYEVEIPLTFVISSMEFDGFRVDKEILNELGDKFTKEIILVEEEIFSLSGEKFNIKSP
KQLGKILFEKLDLPAIKKTKTGYSTNAEVLEALKDKHEIIEKIIYHRQLTKLYSTYVEGL
RNVIDEDGKIHSNFNQTITTTGRLSSTEPNLQNIPIKYAMGREIRKVFIPEEDGNLILSA
DYSQIELRVLAHISSDEKLIEAFKNHSDIHRKTASEVFKVPIEEVTPIMRSNAKAVNFGI
VYGIGDFSLAKDLNISRKEARTYIDTYFDRYPKVKHYLDNSIYEAKENLMVRTILNRRRF
IPEIGSSKKMIVSLGERLAMNTPIQGSAADIIKLAMVKVYNELKNRNLKSKLILQVHDEL
IVNVDESELEEVKSIVKNNMEDAIKLSVPLEVDINVGNNWYESK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
ttggatagagaaaaattagttgttttagatggaaacagtttaatgtatagagcttttttt
gcaatgcccgatcttaccaattcagaaggtttacatactaatgctatatatggatttata
aatatgttacttaaaataaagagtgagtttaagccagaccatatagttgctacttttgat
aaaaaagcccctacttttagacataaggaatatgatgaatataaggctggaagaaaaaag
atgcctgaggaattaagggaacaaaccccatttttaagagaatttctgcaaaaatatgct
gtaaatatatttgaaatagatggatatgaggctgatgacttaattggaactctttctgta
tatgcagaagagaataatatggaagtatacatagttacaggagacagggatgcactccaa
ttagctacagataatgttaaaatagttataaataaaaaaggtatcagtgaaattgaggta
tatgatagggaaagaattataaaagacatgggggttactccaaaagaattcatagatgta
aagggacttatgggagataagtcagataatattaaaggtgttcctggaataggagagaag
accgcgtataagcttataaaagagtataaatccatagaaaatttattattaaatatagaa
aatatcagtggtaaaaaagttaaagaaaacttaatggaatatagagagcaagctatttta
agcaaaagactggcaactataataaccagtgttccaatagaaataaatttagatgaaata
agatcaaaatcagatttagatcttaagggaatagaagagttgttttctaggcttcagttt
aagtcattaataaaaaagcttcctgaaatttcagatatacctatgcaatctgagcaatca
gagaaacaagaagagagtggaaataagcatagagaacttttagatttaacaaaatataat
attaaactcatagatacatataaagatttagattctttaaatttatctggggaagtttat
ttcatatatagtatggaaaatgaaaacatactatctaagatggaaatgacaagtgtaaca
atacttaatggcaataacatatatagtattaattataaggatataaaagaggaagccgga
gaaaaagctaaagatcttttaaaagtattatgttctgataaagttaaacttattggacat
ggtgttaaaagtttctatacatttataagaaaaaacaatcttgatcctaaaacagtggat
tttgatacagaaatagcagcctatttaatagacccaggtaaaaaaggatacgaacttaaa
tctttacaagaaagtttatttcatgtaaactttgaagaacaagaggaattattcaagata
gtttatttaaaagaactttataatgtttttaaagaaagaatattagagttagatatgaaa
gaacttttctatgaggtagaaattcctttaacttttgttatatcctctatggaatttgac
ggatttagggtagataaagaaatccttaatgagttaggagataaatttacgaaagagata
attttagttgaggaagaaatattttctctttcaggagagaaatttaatataaagtctcca
aaacagctagggaaaatactctttgaaaaattagacctacctgcaattaagaagacaaag
acagggtattctactaatgcagaagttttagaagcactaaaagataaacatgaaattata
gaaaaaataatctatcacaggcaattaaccaaactttattcaacatatgtagaaggactt
agaaatgttattgatgaagatggaaaaatccattctaattttaaccaaactataacaact
acaggaaggttatctagtacagagccgaatctacagaatatacccataaagtatgctatg
ggtagagagataagaaaggtatttattccagaggaagatgggaacttaattttgtctgca
gattactcacaaatagaacttcgtgtattggctcatatttctagtgatgaaaagttaatt
gaagcttttaaaaatcatagtgatattcacaggaaaacagcttcagaagtatttaaagtc
cctattgaagaagttacacctattatgagaagtaatgcaaaggcagttaattttggtata
gtatatggtattggtgattttagtttggcaaaggatcttaacataagtagaaaagaagca
aggacatacattgatacttattttgatagatatccaaaagttaaacattatttagataat
tcaatatacgaggcaaaagaaaatttaatggttaggactatcttaaatagaaggagattt
atacctgaaattggttcatcaaagaaaatgatagtatctttaggggaaagacttgctatg
aacacaccaatacaaggaagtgcagcggatattataaaacttgccatggttaaagtttat
aatgagttaaaaaatagaaacttaaaatcaaaattaatattacaggttcatgatgaactt
attgtaaatgtagatgaaagcgaattagaggaagttaaatctatagtaaaaaataatatg
gaagatgctataaagcttagtgttcctttagaagttgatatcaatgtaggcaataactgg
tatgaatctaagtag
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