Hathewaya histolytica: NCTC503_01430
Help
Entry
NCTC503_01430 CDS
T05971
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03030
DNA replication
hhw03430
Mismatch repair
hhw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC503_01430 (polC)
03430 Mismatch repair
NCTC503_01430 (polC)
03440 Homologous recombination
NCTC503_01430 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhw03032
]
NCTC503_01430 (polC)
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_01430 (polC)
Enzymes [BR:
hhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC503_01430 (polC)
DNA replication proteins [BR:
hhw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC503_01430 (polC)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC503_01430 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
VP_N-CPKC
Motif
Other DBs
NCBI-ProteinID:
VTQ89562
UniProt:
A0A4U9RCU2
LinkDB
All DBs
Position
1:complement(1423622..1427944)
Genome browser
AA seq
1440 aa
AA seq
DB search
MDVILQVLKEKLKEEEFLKLKDFRFLKVQYYKTLNKISLILKGKNALGVSLQEDIKIILK
DFFKCFDEIELIFYKDISDIKLQDICNEYWIELVENISDKMPLFKECLLNSKRVIKEDTL
SIYYGNSFVCKFLKEKNIEKLVSDRIYEIFDVRCNVIIDYIDELKDINYFEEKEKENFGI
IKNVLSNQIVSNNKYENNTKKDHRKKEYNNSIKENSNQVLGKNIIEEPIPIKDINLDLGK
ACIEGDLFKLEIKETKTGKTFFIFNITDYTSSITLKCFPNQNAVEKLTEELKKGCHYKIK
GDVTYDKFINENIIFAHHITKLDKIEKLDLCDEKRVELHLHTNMSSMDGITSAKKLVERA
AKWGHKAVAITDHGVAQAFPDAMEAGKKNKIKVIYGVEAYFVDDGESIILGGEDTTIEDE
FVVFDIETTGFSSENDKIIEIGAVKIKDGVIIDSFNEFVNPNKSIPYNITELTGITNDMV
IDKDDISIVLPKFMHFLGDSVVVAHNSTFDTSFIRKNCRDLNMDFNNPIMDTIPLSKFLY
PELKRYKLNVVAKHLNISLENHHRAVDDARATGEILIKSFEKLKELNILKMGDLNKEFLG
NFNIKSAFTSHLIILCKNQIGIKNLYKLISFSNLDHFYKKPRIPKSLIEQYREGLIIGSA
CEAGQVFKEVLMGKTYDELKETLSFYDYLEIQPIGNNKFLVDSGRVKDEEELRNINKRIY
NIGKKANLPVVATGDVHFLDPQDEVFRRILMAGQGFSDADNQPPLYFKTTEEMLKEFSYL
GDDISREVVIKNTNLIADMIEEVKPIPEETYTPKIDGAEEDIKKMTLDKAYSIYGNPLPE
VVQKRLDKELNSIINNGYAVLYLIAHKLVAKSVEDGYLVGSRGSVGSSFVATMCNITEVN
GLPPHYVCPKCKYSEFILDGSVGSGVDMEDKNCPKCGELFYRDGFDIPFETFLGFEGDKE
PDIDLNFSGDNQGEIHKYTEVLFGEGHTFKAGTIGTIADKTAYGFVKKYLDERGINVPNA
EIERLTEGCTGVKRTTGQHPGGIMVVPSDNEIFNFCPIQHPADDSQSDIITTHFDYHSIS
GRLLKLDILGHDDPTVLRMLKDITGLDPKTVPLDDEAVLSLFTCTDALGITKEQLGCEVG
TYGLPEFGTKFVRQMLLDTKPETFSDLVRISGLSHGTDVWLNNAQYFIKEGYTTLRDCIA
TRDDIMVYLIYKGLPPKIAFTIMEKVRKGRGLTEEHENIMKEHKVPSWYIESCKKIKYMF
PKGHAVAYVMMAIRIAYFKVHYPRAYYASYFTVRGDDFDGDLVIRGDDAIINKMGELYEQ
GNNISVKDKGLLTTLEICHEMFQRGIKFLPCDIYKSSSVKFILEDDSIRLPLSALQGVGK
NAAKSIEEARVNGEFISKEDLRNRAKVTKTVIEALDKHGCLRGLPDTNQLSFFTEEIGII
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaatactacaggtgcttaaggaaaaattaaaagaagaagagtttttaaaactt
aaagattttagatttctaaaggtacagtattataaaactttaaataaaattagtttaatt
ttaaaaggtaaaaatgctcttggagtttccttacaagaagacataaagataatattaaaa
gacttttttaagtgtttcgatgaaattgaacttatattttataaagatatttctgatata
aaattacaagatatttgtaacgaatattggatagaattagttgaaaatatatcagataaa
atgcccctttttaaagaatgtcttttaaattctaaaagggttataaaagaagatacatta
agtatctattatggcaatagttttgtatgtaaatttttaaaagaaaagaatatagaaaaa
ttagtttctgatcgtatttatgaaatttttgatgttagatgtaatgtaattatagattat
atagatgaactaaaagacataaattattttgaagaaaaggaaaaagagaactttggaata
ataaaaaatgttttaagtaatcaaatagtttcaaataataaatatgaaaataatactaaa
aaggatcacaggaaaaaggaatacaataattctattaaagaaaatagtaaccaagtttta
ggcaaaaatattattgaagaacctatacctattaaagatataaatctagatttgggaaaa
gcgtgtatagaaggagatttgtttaagttagaaataaaggaaactaaaacaggaaaaact
ttctttatatttaacattacagattatactagctccattacattaaaatgttttccaaat
caaaatgcggtagaaaaattaacagaagaattaaagaaaggttgtcactataaaatcaaa
ggggatgttacttacgataagtttattaatgaaaatatcatttttgcccatcatataaca
aagctagataaaattgaaaagttagatttatgtgatgaaaagagagttgagttacactta
catactaatatgagttctatggatggaataacttccgcgaaaaaattagtagaaagggca
gctaaatggggacataaggccgtggctatcacagatcatggagtggctcaagcatttcca
gacgccatggaggctggtaaaaagaataaaataaaggttatttacggagtagaagcttat
tttgtagatgatggtgaatctataatattaggtggagaagatactactatagaagatgaa
tttgtagtttttgatattgaaactacaggattttctagtgaaaatgataagattattgaa
attggtgcagtaaaaataaaagatggggtaataatagattcatttaatgaatttgtaaat
cccaataaatccataccatataacatcacagaacttacaggcattacaaatgatatggta
atagataaagatgatataagtattgttttacctaaatttatgcattttttaggtgattca
gtagtagttgcacataattccacctttgatacctcattcatacgaaaaaattgtagggat
ttaaatatggattttaataatccaattatggatactatacctttaagtaaatttctatat
ccagaattaaaaagatataagttaaatgttgtagcaaaacatcttaatatttctctagaa
aatcaccatagagctgtggatgatgcaagagctactggtgagattttaataaaatctttt
gaaaaattgaaagaacttaacatactaaaaatgggagatttaaataaagaatttttaggg
aactttaatataaaatcagcatttacctctcatcttataattctttgtaaaaatcagata
ggaattaaaaatttatataaattgatttctttttctaatctggatcatttttataaaaaa
ccacgtatacctaaaagcttaattgaacaatatagggaaggtttgattataggatcagct
tgtgaagcaggtcaagtatttaaagaggttttaatgggaaaaacctacgatgaattaaaa
gaaaccttatctttctatgattatttagaaatacaacctataggaaataataaattttta
gttgatagtggtagagtaaaagatgaagaagagttaagaaatataaataaaagaatttac
aatataggcaaaaaagctaatctaccagtagttgcaacaggagatgtacactttttagat
cctcaagatgaggtgtttagaagaattttaatggctggacaaggatttagtgatgcagat
aatcaaccacctctttattttaagactacagaagaaatgttaaaagagttttcttattta
ggggatgatatttcaagagaagttgtaattaaaaatactaatttaattgctgatatgata
gaagaagttaaacccataccagaagaaacgtatacacctaagattgatggtgctgaagaa
gatataaagaaaatgacattagacaaagcttattctatatatgggaatccgttaccggaa
gtagtccaaaaaagattggataaagagcttaactcaattataaataatggatatgcagta
ttatatttaattgcacataaattagttgcaaaatcagtggaggatgggtacttagtaggg
tctaggggatctgtaggttcttcatttgtagccactatgtgtaatattacagaagtaaat
ggtcttccaccacattatgtatgtccaaaatgtaagtatagtgaatttatattggatggc
tctgtaggatcaggagtggatatggaagataaaaattgtcctaaatgtggtgaattgttt
tatagagatggttttgatataccctttgaaactttcttaggatttgaaggagacaaggaa
cctgatatagaccttaatttttcaggagataaccagggagagattcataaatacacagag
gtacttttcggtgaaggacatacttttaaggcaggaacaataggaactattgcagataaa
actgcctatgggtttgtaaaaaaatatttagatgaaagaggaataaatgtacctaatgcc
gagatagagaggctaacagagggatgcactggagttaaaaggactacagggcaacatcca
ggcggtattatggttgttcctagcgataatgaaatatttaacttctgccccatacaacat
ccagctgatgactctcaatcagatattataactacacattttgactatcattcaataagt
ggtagacttttgaaattagatatacttggccatgatgacccaacagttcttaggatgtta
aaagatataacaggattagatcctaaaaccgtacctttagatgatgaggctgtgctaagt
ctgtttacttgtacagatgcgctagggattactaaggaacaattaggttgcgaagttgga
acatatggtctaccggaatttggcacaaagtttgtacgtcaaatgctcctagatacaaag
ccagagactttttctgatttagtgagaatatcaggactatctcatggtactgatgtttgg
cttaacaatgctcaatattttattaaggaaggatacactacattaagagattgtatagca
accagagacgacataatggtttatttaatatataaaggacttcctcccaaaatagcattt
actataatggaaaaggtaagaaaaggaagaggtcttactgaagaacatgaaaatataatg
aaggagcataaagtacctagttggtatattgaatcttgtaagaagataaaatatatgttc
cctaaaggtcatgctgttgcctatgttatgatggcaattagaatcgcttattttaaagtt
cactaccctagagcttattatgcttcgtattttactgttagaggtgatgattttgatggt
gaccttgtaataagaggtgacgatgctatcataaataaaatgggtgaactatatgagcag
ggtaataatataagtgtaaaagacaaaggtcttcttacaactcttgaaatatgtcatgaa
atgtttcaaaggggcataaagtttttaccttgtgatatatacaaatcaagttcagttaaa
tttatactagaagatgatagtatcagacttccgcttagtgcacttcaaggtgtaggtaaa
aatgcagctaagagtatagaagaagctagagtaaatggtgaatttatttctaaggaagac
ttgagaaatagagcaaaagtcacaaaaactgtaattgaggcactggataaacacggatgc
ttaagaggattacctgatacaaatcaactttcttttttcaccgaagaaattggaattata
taa
DBGET
integrated database retrieval system
