Hathewaya histolytica: NCTC503_02368
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Entry
NCTC503_02368 CDS
T05971
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hhw
Hathewaya histolytica
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_02368 (sbcC)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC503_02368 (sbcC)
Archaeal homologous recombinant proteins
NCTC503_02368 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
AAA_21
RNA_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
VTQ94691
UniProt:
A0A4U9RSR9
LinkDB
All DBs
Position
1:complement(2368441..2371965)
Genome browser
AA seq
1174 aa
AA seq
DB search
MKPIRLEIKGLNSFIENQVVDFEKLTSKGLFGIFGPTGSGKSTILDAITLALYGKISRNS
TNYINTNCDELIVGYEFEILRDGERKNYIAERCIKRDKHGSIKTKYARLVENKVNVIAEG
PMEVNNTSLQIIGLNCDDFTRSVVLPQGKFSEFLSLKGKDRRNMLERIFALEKYGNNLYR
KVASINKKYVDEKNVLIGKLKKYEDLTYEMYKEKNNEVKILNEKEELLKRKKEEVDKEYI
ELKELGELTEEIYSYKNRETILNEKQKVIDTDKVRLEKGKSSLKIKPFIEELELNKSNLE
NEEKYLLDINRKLDENKFTLKEIEDEFKKVDQEKTYRLPSLIGDKENVSRALELYKRCNS
IKEEREKLVEQYKILRGESNTKENERKEIVLEIGNFEEQEQILNKKIRELEYGEEEKDLL
EEAVMIYREVQSKHELLKEKEEKEKEKKKNIESLKKDYEICLKSKKEILDKIDIEEEKKT
DLTKNFPGHNNLLLSFKDEIGVLTEKVKNKEVLEEKIENLGLIIKEKSLRKVNLEEEVDN
LQNKYKLLEEKYKAEEEIYEKLKIDNLSYIIRKELNDGDTCPVCGSIHYKNEVEEIDSGE
LEGIKYNLDNIRTSKEEVKEKLNSAKNNLIIIKREEEDLVKEINSYKEDSLGIGDLKTLK
VDLENKNLLFNKTQLDIENFEKEKNNLELNLLDLNKQKDKIFSSEAMLGERLNGEEKALT
SLLDEIKVLKDALDNFIQKLEGIKREINVQNVEGKWIEIKENEKQIKRYREQVSLDIENK
KKLLLVKENLTKEIGDLQSEMKSIEEVGKEKKSNIDVFEKEISGITKGEAPEKVLRIILD
EIDRINTSYDKYKKEIETVKDRVKGLEDEFIKKNQIKEDLEKRCVKIEEQLNNLFKENDF
INIKHCLESYISKEKLEDIENEIKSYEDEKSILLGNIKRVEDRLKGRYVEKEKIKEVKDK
KETIETSLMETVREKATLEKHIMDIKKDLDELKVLRNEEKTLDHKLSLLDDIMKLFKGNK
FVEFVAMNRLKYIAFEASKRLKDITCNRYALEIDGEGNFTIRDDMNGGVVRDCTTLSGGE
TFLTSLALALSLSSQIQLKGSSPLEFFFLDEGFGTLDSNLLEVVISSLEKLHNNKMSVGI
ISHVDELKGRVPIKLIVNPNKFGEGGTKVKIELS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctataaggcttgagataaaggggttaaatagttttattgaaaatcaggttgtg
gattttgaaaagttaacatctaaaggtttatttggaatatttggacctactggtagtggt
aaatctactatattagatgctattacattggctttgtatggcaagatatcaagaaatagt
acaaattatataaatactaattgtgacgaacttatagtaggctatgagttcgaaatttta
agagatggtgaacgaaagaattatatcgcagaaaggtgtattaaaagagataaacatgga
agtattaaaacaaaatatgcaaggttagttgaaaataaggttaatgttattgcagaagga
cctatggaggttaacaatacttcacttcaaatcataggacttaattgtgatgatttcacc
cgttctgtagtactaccacagggtaagtttagtgagtttttaagtctaaaaggaaaagat
agaaggaatatgttagagcgaattttcgctcttgaaaagtatggaaacaacttgtataga
aaagtagcatccattaataagaaatatgttgatgagaaaaatgttctaattggaaaactt
aaaaagtatgaagatctaacttatgagatgtataaagaaaaaaataatgaagttaaaatt
ctaaatgaaaaagaagaattactaaagagaaaaaaagaagaagtagataaagaatatata
gaactaaaagaattaggagagttaactgaggaaatttatagctataaaaatagagaaacc
atactaaatgaaaagcagaaagtaattgatacggacaaggttagattagaaaagggtaag
agtagccttaagataaagccttttatagaggaattagagcttaataaaagcaatttagaa
aatgaagaaaaatatcttttggatataaataggaagttagatgaaaataaatttacatta
aaagaaatcgaggatgaatttaaaaaggtagatcaggagaagacatatagacttccaagt
ttaataggggacaaggaaaatgtgtctagggctttagaattgtataaaagatgtaattct
attaaagaagaaagagagaaattagtagaacaatataagatacttaggggagaaagtaat
actaaagaaaatgaaagaaaagaaatagtactggaaattggaaactttgaagaacaggag
caaattctaaataaaaaaataagggaattagagtacggagaagaagaaaaagatttatta
gaagaagctgtaatgatatatagagaagttcaaagcaagcatgaacttttaaaggaaaag
gaagaaaaagagaaagaaaagaaaaaaaatatagagagcttaaagaaggattatgaaata
tgtttaaaatccaaaaaagaaattttggataaaatagatatagaagaggaaaaaaagaca
gatttgacgaaaaatttcccaggacataataatttgttactttcttttaaggatgaaata
ggagttttaactgaaaaggttaaaaataaggaagttttagaagaaaaaattgaaaactta
ggattaataataaaggagaagagtttaagaaaggttaatttagaagaagaggtagataat
cttcaaaataagtataaattattggaagaaaagtacaaggcagaggaagaaatttatgaa
aagcttaaaatagataatctttcttatattataagaaaagagttaaatgatggagacaca
tgtccagtctgtggttccattcattataaaaatgaagtagaggaaatagattctggtgaa
ttggaaggcataaagtataatttagacaatattagaacatctaaagaagaggtgaaagaa
aagctaaatagtgcgaaaaataatcttattataattaaaagggaagaagaggatttagtt
aaagaaataaattcatataaggaagattccttaggcataggcgacctaaaaactttaaaa
gttgatttagagaataagaacttactttttaataagactcaacttgatatagagaacttt
gaaaaggaaaaaaataatttagagttaaatttattagacttaaataaacaaaaagataaa
atattttcaagtgaagctatgttaggagaaagattgaacggcgaggaaaaagctttaact
agtttgttagatgaaattaaagttttaaaagatgccttagataattttatacagaagcta
gaaggtattaaaagagagataaatgtacaaaatgtagaaggaaaatggatagaaattaag
gaaaatgagaaacaaataaagcgttatagagaacaagtaagtttagatatagaaaataag
aaaaagttattattggttaaagaaaatttaacaaaagaaattggtgacctacaatctgaa
atgaaatctatagaagaggtgggcaaagaaaagaaaagtaatatagatgtttttgaaaaa
gaaatatcaggaattacaaaaggggaagcacccgagaaagttttaagaataatattagat
gaaattgatagaataaatacttcttatgataaatataaaaaagaaattgaaactgtaaaa
gatagagtaaagggattggaagatgaatttataaagaaaaatcagataaaggaagattta
gagaaaagatgtgttaaaatagaggaacaacttaataatctttttaaagaaaatgatttt
ataaacataaagcattgcttggaatcttatataagtaaggaaaaactagaagatatagag
aatgaaattaaatcttatgaagacgagaagagtatcttgctgggtaatataaaaagagta
gaagatagattaaaaggaagatatgtagaaaaggaaaagattaaagaggtaaaagataaa
aaagaaactatagaaacttcacttatggaaactgttagagaaaaagctactcttgaaaag
catataatggatataaagaaagatttagatgaacttaaggttttaagaaatgaagaaaaa
actttagaccataaattgagtcttttagacgatataatgaaactttttaaagggaataaa
tttgtggaattcgtggctatgaatagacttaagtatatagcttttgaagcatcgaaaagg
cttaaggatataacttgcaacagatatgccctagagatagatggtgaaggtaattttacc
ataagggatgatatgaatggaggagtggttagagattgtactactttatctggtggagaa
acctttctaacttctcttgccctagcattatcattgtcctcacagatacaattaaaaggt
agctctccattagaatttttctttttagatgaaggttttggtactttagattctaatctt
ttagaagtagttataagttcccttgaaaaacttcataataataagatgtctgtgggtatt
ataagtcacgtagatgagcttaagggcagggttcctattaaacttatagtaaatcctaat
aagtttggagaaggcggaacaaaggtcaaaatagaactgagttaa
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