Haliscomenobacter hydrossis: Halhy_0167
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Entry
Halhy_0167 CDS
T01491
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Halhy_0167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhy03019
]
Halhy_0167
Enzymes [BR:
hhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Halhy_0167
Messenger RNA biogenesis [BR:
hhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Halhy_0167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AEE48080
UniProt:
F4KTT6
LinkDB
All DBs
Position
182312..183667
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AA seq
451 aa
AA seq
DB search
MNFTEFGLHPDLLDGVDAMNYKTATPIQEKAIPIILEGKDLIGIAQTGTGKTAAFILPVL
NEIIESGEANFIQTLVIVPTRELAVQIDQVIEAYSYFTGVSSIAIYGGGDGKEFAQEKNA
LVSGVDIVIATPGRLISHLNMGYVNFSKLRFLVLDEADRMMDMGFQPDLMRIIGKIPQKR
QTLLFSATMPESVMKLARQLTHNAESVSIALSKPAEGVTQRAYVVYEEQKLQLVTELLKD
RKGQRIVVFCSSKASVSSLYSKLHRKNLSVGQMSSDVEQDQREETMLAFRNSKIDIIVAT
DVISRGIDVDGIDLVVNYDVPRDPEDYVHRVGRTARAERKGEAITLVSPGDQLRFRRIEK
LIDKDIEKLGPPQNLGPGPEYAPNARRGKTFGPPHRQANAQGKGGNNQHSNRSNSGGGGG
GPHKKKSGSGSSRWNNKPKPSGERTEPRRDV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcactgaatttggcctacatcccgacctgttagatggcgttgacgcgatgaat
tacaaaacggccaccccgatacaagaaaaagcaatccccattatcttagaggggaaagac
cttattggcatagcccagacaggcacaggcaaaacggcggcttttattttacccgttttg
aatgaaatcattgaatctggcgaagccaatttcattcaaaccttggttatcgtacctacc
cgcgaattggccgtacaaatcgatcaagtcattgaggcatattcctactttactggagta
tcctctattgccatctatggtggtggcgacggcaaagaatttgcccaggaaaaaaatgca
ctggtcagtggggttgatattgtcattgctacgccaggacgcctgatttcccacctcaac
atggggtacgtcaatttttccaaactgcgcttcctcgtactggatgaagccgaccgcatg
atggatatgggttttcaacccgacctcatgcgcatcattggaaaaattccgcaaaaacgt
caaaccttgctgttttcggcaaccatgcccgaatcggtcatgaaactggcgcgccagttg
acccacaatgcggaatcggtcagcattgccttatccaaacccgccgaaggcgttacccaa
cgtgcttatgtggtgtacgaagaacaaaaactccagttggtgaccgagctcctcaaagat
cgcaaaggccaacgaatcgtggttttttgttcctccaaggcatcggttagttcgctgtac
agcaaactgcaccgcaaaaacctgtctgtgggtcaaatgagcagcgatgtcgaacaggac
cagcgcgaagagaccatgctggctttccgcaacagcaaaattgacatcattgtagctacc
gacgtcatcagccggggtattgatgtggatggaatcgatctggtggtcaactatgacgta
ccacgcgaccctgaagattatgtccaccgcgtaggtcgtaccgccagagcagagcgcaaa
ggcgaagccattacgctggtttcaccgggtgatcaactgcgttttcggagaattgaaaaa
ctcatcgataaagacatcgaaaaactgggaccaccgcaaaacctgggtcctgggccggaa
tacgcgcccaacgcgcgtcgaggcaaaacttttggccctccacaccgtcaggccaatgcc
caggggaaaggtggcaacaaccaacattccaaccgttccaatagcggcggtggtggaggt
ggcccacacaagaaaaaatccggctcgggttcttcccgctggaacaacaaaccgaaacct
agcggagaaagaacggaaccgagaagagatgtataa
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