Haliscomenobacter hydrossis: Halhy_0381
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Entry
Halhy_0381 CDS
T01491
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Halhy_0381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhy03400
]
Halhy_0381
Enzymes [BR:
hhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halhy_0381
DNA repair and recombination proteins [BR:
hhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halhy_0381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
PriA_CRR
AAA_30
nSTAND3
AAA_11
AAA_19
IstB_IS21
SLFN-g3_helicase
AAA_22
ATPase
AAA_16
Zeta_toxin
ATPase_2
TrwB_AAD_bind
TsaE
DUF3638
Flavi_DEAD
PIF1
Motif
Other DBs
NCBI-ProteinID:
AEE48292
UniProt:
F4KX64
LinkDB
All DBs
Position
483614..486085
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AA seq
823 aa
AA seq
DB search
MSELHPTSDSNTYVTVILPMAVPKPYTYAVPEEWVSKVQVGVRVEVQFGPKRQYAALVLE
VLNTSPGHKTKSILSVIDDTPIIWAEQLRFWQWVGQYYCCTLGEVMHAALPANLKLASET
SITLSPLFEGDIMELEDRAYLIAEALTIQHELTLEQVRDILGIKTIYPLIRDLLDKRIIY
LKEDLKEKFKAKTLACVRLREPYASQPETLQDAFDKLSRATRQVEALMAFLQLARGQDYI
RREELYKLAKVDSSVIQAMEKKGILEVYEREVSRIGGYEDEIVEADVLSAQQERAIAEIH
TQFEEKNVILLQGVTGSGKTRVYVELIREAMRRGEQVLYLLPEIALTTQIIERLQRVFGD
QVDVYHSRLNNNERVEIWNRAKEGKALVLGARSALFLPFRNLKLVIIDEEHDPSFKQQDP
NPRYHGRDAGIYLAQLFGAKVLLGTATPSVESFYNTQVGKYGLVRMPERFGGLELPEVEI
VDLKKALRAGSMQSHFSVTLLNEMKATLERGEQVILFQNRRGYAPVYKCSTCNWTCECIH
CDVSLTYHKGQNNLKCHYCGYQTQLPKACPACGGKQLIVQGFGTEKVEDELKIFLPDAKI
GRMDLDTVRSKNAHTKIINDFEEGRINVLVGTQMVTKGLDFEKVGLVGVLSADQLLQFPD
FRAGERAFQLMLQVAGRAGRKHKRGKVIIQSHNVANPVIKEVLDGDFKAFYSREIMERQE
FFYPPFYRLIRITLKHKKPEVVNAAAQKYGNFLRAKLGDRLRGPAVPYVGRVRSYFLIDF
LIKLERNPQLIANTKDLIAAADHFLLQEEGYSSVKIAVDVDPF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcttcatcccacgtctgatagcaatacctacgtcaccgtcattctccccatg
gcagtacccaaaccctatacctacgcggtacccgaagaatgggtgagcaaggtacaggtc
ggtgtgcgcgtggaagtacagtttggtcccaagcgacaatatgcggccctggtattggag
gtgttgaatacctcgcccggacacaaaaccaaaagtatcctttccgtcatcgacgatacc
ccaatcatttgggccgaacaactgcgcttttggcaatgggtcgggcagtattattgctgt
accctgggtgaggtgatgcacgcagccttgcccgccaacctcaaactcgccagcgaaacc
agcatcaccctcagtccattgtttgagggcgacatcatggaactcgaagaccgggcctac
ctcatcgccgaggcgctgaccatccagcacgaactcactctagagcaagtgcgcgatatt
ttgggcatcaaaaccatctaccccctcatccgcgacctgctggacaaacgtatcatttac
ctcaaggaagacctcaaagaaaaattcaaagccaaaaccctcgcctgtgtgcgcctgcgc
gagccctacgcgagtcaacccgaaaccctgcaagatgccttcgacaaactcagccgcgcc
acccgtcaggtggaagccctgatggcctttctgcaattggcacggggacaggattacatc
cgtcgggaagagttgtacaaactcgccaaagtggattccagcgtcatccaggccatggaa
aaaaagggaatcctggaagtctacgaacgggaagtcagccgcattggtgggtacgaagac
gaaattgtggaagctgacgtgctcagcgcccagcaagaacgtgccattgcagaaatccat
acccagtttgaagaaaaaaacgtcatcctcctgcaaggggtcaccggaagtgggaaaacc
cgagtgtacgtggagttgatccgtgaggccatgcgtcgtggagaacaagtcttgtacctt
ttgcccgaaattgccctgaccacccaaatcattgaacgcctgcaacgcgtttttggcgac
caggtagacgtgtaccactcccgcctcaacaacaacgaacgggtggaaatctggaaccgc
gccaaggaaggcaaagccctggttttgggggcgcgctcggccttgtttttgcccttccgc
aacctcaaattggtcatcatcgatgaggagcacgatccttctttcaagcagcaagacccc
aatccgcgttaccacgggcgggatgcgggcatttatctcgctcagttgtttggggccaaa
gtgctgctgggcacggccacgccctcagtagagtccttttacaatacccaggtgggcaaa
tacggactggtgcgtatgcccgagcgttttggcggactggaattgccggaagtagagatc
gtcgacctcaaaaaggccctgcgtgcaggaagcatgcaatcccacttttcggtgaccctg
ctcaatgaaatgaaagcgaccctggaacggggagaacaggtgattttgttccaaaaccgc
cgggggtatgcgcccgtttacaagtgcagtacctgcaattggacctgcgagtgcatccac
tgcgacgtgagcctgacctaccacaaagggcaaaacaacctgaaatgccattattgtggc
taccaaacccagttgcccaaagcatgcccggcttgcgggggcaaacagttgatcgtacaa
ggttttggtacggaaaaagtggaagacgaactaaaaatatttctgcccgatgccaaaatt
gggcgcatggacctggataccgtgcgcagcaaaaatgcccataccaaaatcatcaacgat
tttgaagaaggccgcatcaacgtgctggtgggtacccaaatggtcaccaaaggactggat
tttgaaaaagtgggtctcgtgggggtactgagcgccgatcaattgttgcagtttcccgat
tttcgcgccggagaacgggcttttcaactgatgctgcaggtggcaggccgggccgggcgc
aaacacaagcggggcaaggtgatcattcagtcgcacaatgtggccaacccggtcatcaaa
gaggtgctcgacggcgacttcaaggccttttacagccgtgaaatcatggagcggcaggag
tttttttacccgcctttttaccgcctcattcgcatcactttgaagcacaaaaagccggag
gtggtcaatgccgccgcccaaaaatacggcaattttttgcgggcaaaactgggtgatcgc
ctgcgtggcccggcggtgccttacgtgggtcgggtgcgctcctattttctgattgatttt
ctgattaaattggagcgcaatccgcagttgattgccaacaccaaggatttgatcgccgcc
gctgatcattttttgttgcaggaagaggggtattcgagtgtgaagattgcggtggatgtg
gatcctttttag
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