Haliscomenobacter hydrossis: Halhy_0948
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Entry
Halhy_0948 CDS
T01491
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Halhy_0948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhy03021
]
Halhy_0948
Transcription machinery [BR:
hhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Halhy_0948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PF0610-like_N
Sigma70_ECF
HTH_23
HTH_5
GerE
PCI
HTH_Tnp_4
HTH_10
HTH_24
RUNDC1
CC_CEP152-bind
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AEE48849
UniProt:
F4L6G7
LinkDB
All DBs
Position
complement(1170574..1171155)
Genome browser
AA seq
193 aa
AA seq
DB search
MQTKLNDQEFFDLLSTNAEKAFEWLFRRYFTELCQVVYRVTPDEHLAQDLVQEVLYELWR
KRDQLTITTSLRAYLKRAVLNRTLNHLRDNRKWSGEEGMPEIADQEFDPTENMRAEELQQ
RVDAAIDELPERCRMVFVLSRYEELSYRDIATELGIAEKTVENQVSKALKYLRERLQPFL
KDGLFLLILWLGT
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaccaagctgaacgaccaagaatttttcgatttgttgtccacaaatgccgaaaag
gcatttgaatggttgttccgcaggtactttactgaattgtgccaggtggtgtatcgcgtt
actccggatgagcaccttgctcaagacctggtacaagaggtgttgtatgagttgtggcgc
aagcgggatcaattgaccatcaccacgtcattgcgggcatacctcaaacgtgcagtgttg
aatcgaaccttgaaccatctccgcgacaaccggaagtggtcaggggaagaaggaatgccc
gaaattgccgaccaggaatttgatcctaccgaaaacatgcgtgcggaagaactacaacaa
agggtcgatgcagcgattgatgaacttcccgaaagatgcagaatggtgtttgtactgagt
cggtacgaggaactttcttatcgggacatcgccacagaattgggtattgctgaaaagaca
gtggaaaaccaggtctcaaaagcattgaaatacctgcgagaacgccttcaaccttttttg
aaagacggcttgtttttattgattttgtggttggggacttag
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