Haliscomenobacter hydrossis: Halhy_2199
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Entry
Halhy_2199 CDS
T01491
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Halhy_2199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhy03400
]
Halhy_2199
Enzymes [BR:
hhy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Halhy_2199
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Halhy_2199
DNA repair and recombination proteins [BR:
hhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Halhy_2199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AEE50081
UniProt:
F4KT11
LinkDB
All DBs
Position
complement(2854027..2854803)
Genome browser
AA seq
258 aa
AA seq
DB search
MPELPEVNTFQRYFDESALQQRIARVDVHDDKIIRNMDGASFAERLHGRTFTGSYRRGKY
LFAQLDNGHHVLLHFGMTGDIKYYEDPIDKPKHERFAFVFDNGFQLGFDDPRKFARILYL
EDLQAYIDSLPLGEDALRISEADFLQLISNKKGQLKAFLLQQQNLAGVGNLYADELCYQT
RIHPAARIESLSLEDKKLLFTTLQKILNYAVERRAYYKDYPEDWLWQWRVEGFVPPDGKG
VVRKGTIAGRTTYFLSEN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcaacaccttccaacgctactttgacgaaagcgctttacag
cagcgcattgcccgggtagacgtgcacgacgacaagattatccgcaacatggatggtgcc
agctttgcggagcggctgcatggacggacgtttacgggctcttaccgccggggcaaatac
ctctttgctcagctggacaatggccaccacgtgttgctgcattttgggatgacaggcgac
atcaaatactacgaggatcccatagacaaacccaaacacgagcgttttgcctttgttttt
gacaatggttttcagttgggtttcgacgacccacgcaaatttgcccgcattttgtacctg
gaagacctgcaagcctacatcgactccttacccctgggagaggatgccctgcgcatcagc
gaagccgattttctacaactgatcagcaacaaaaaaggccagctcaaagcatttttgctg
cagcaacaaaacctggcgggcgtaggcaatttgtatgccgatgaactttgttaccaaacc
cgtattcaccccgcagcgcggattgaaagtttgtcattggaagataaaaaactgcttttt
actaccctgcaaaaaatcctcaattacgccgtcgaacgccgggcctattacaaagattac
cccgaagattggttgtggcaatggcgggtagaaggttttgtaccacccgatggaaaagga
gtagtgaggaagggaacgattgcggggcggacgacttattttttgagtgaaaattga
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