Haliscomenobacter hydrossis: Halhy_2688
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Entry
Halhy_2688 CDS
T01491
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03420
Nucleotide excision repair
hhy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halhy_2688
03430 Mismatch repair
Halhy_2688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhy03400
]
Halhy_2688
Enzymes [BR:
hhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halhy_2688
DNA repair and recombination proteins [BR:
hhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halhy_2688
MMR (mismatch excision repair)
Other MMR factors
Halhy_2688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_11
Cas_NE0113
DEAD
FerA
Motif
Other DBs
NCBI-ProteinID:
AEE50556
UniProt:
F4L0V2
LinkDB
All DBs
Position
complement(3436295..3439420)
Genome browser
AA seq
1041 aa
AA seq
DB search
MQYTESFLRELAKLNPAQRSAVEQIEGPVMVIAGPGTGKTHILAARIGKILLETDTQAQN
ILCLTFTDAGVTAMRERLLQLIGPDGHRVHIYTFHSFCNAVIQDNLELFGRQDLEPLGDL
EKVDLIRALIDELDVEHPLKRGQSDVYFYETHLQDFFQRCKMEDWTAEYVIQQIDAWLAS
LPDRPEYRYQRKQGAQQKGDLKEAKIKEEQIRMQRLRAAAALYPRYEAAKQAARRYDYQD
MILWVLRAFETHDYLLRSYQEQYLYVLVDEYQDTNGSQNEILLQLINYWETPNVFLVGDD
DQSIFEFQGARLKNLTDFYAKYQHNLHTVVLTENYRSVQGFLDAAGQLIQNNQLRIISHL
QALGLNKNLVAAAVKGKATPLISEYPNRISEETDIVQQIEALQQKGIPLQEIAIIYAQHR
QVRNLLGLLEKKGIPYQTRRDVNILELPLIQRLRSLLDYLHHETLQPHSGELRLFQILHA
HFLGISPLDLARLSTHLARFPADVRPPWRELLLDHAALGELNLEKPAVLTNFAILLEELI
ADCLNEPLPTLLEKLLNRSGFLQYILEQPNHAWQIQVLHTFFQYVREECQRRPHYSLAEL
LHNLHRMEANRLPLALSRLSDDQVGVHLLTAHAAKGLEFTAVFMLDCVKDYWEPASGRNS
YRFTLPETLTYSGEEDATEARRRLFYVALTRAKTFLHLSYARQDDSEKELQRALYIDELL
STQTLALEQKVLPAPLVLSTQLLRLQEQQKPSVAPQDRSMIEAILRNFRMSISALNTFLN
CPLAFYYEYILKVPGLHNEATAYGTAVHNALQRLFDRMLLSPQRLFPSEKELLYFFEQEL
NRQRQQLSLPSFERRLELGKRQLGRYYQYYYGRWHKRVRVEYTIRQIEVDGVPLTGTIDK
IEFYDQLRVGIIDYKTGSHDGTKLRRPTDTNPYGGTYWRQLLFYKLLYEHFDRSSRRVTF
GEIAYLDPTPDGQFPEVRLSFTPEDTAFMRQMIREAYAKIRKHEFYEGCGKANCAWCNFV
KREGGVDRIERVVVGELDDRG
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaccgagtcgttccttcgcgagttagcaaaactcaatcccgcccagcgctcc
gccgttgagcagattgaagggccggtgatggtgattgcggggccgggcaccgggaaaaca
catattctagcagcgcgtattggaaaaattctgctcgaaaccgatacccaggcccaaaac
atcctttgccttaccttcaccgatgccggagtgacggccatgcgcgagcgcttgctgcaa
cttatcggaccggatggtcatcgggtacacatttatacctttcactccttttgcaacgcg
gttattcaagacaacttggagctttttggtcgccaggatttggaacccctgggcgatttg
gaaaaggtcgacctcatccgcgccctgattgatgaattggatgtagaacacccactcaaa
cgcgggcaaagtgacgtgtatttttatgaaacgcacctccaggattttttccagcgttgc
aaaatggaagactggacagcggagtacgtcattcagcaaatcgacgcctggctggccagt
ttgcccgaccgccccgaataccgctaccaacgcaagcagggcgctcaacaaaagggcgac
ctcaaggaagccaaaatcaaagaagagcaaatccgcatgcaacgcctgcgggccgccgcc
gcactctacccgcgctacgaagccgccaaacaagccgctcgccgctacgattatcaggac
atgattttgtgggtgttgcgtgcttttgaaacccacgattaccttttgcgcagctatcag
gagcaatacctctacgtgttggtggacgagtaccaggataccaatggctcccaaaacgaa
atcctgctgcaattgatcaattattgggagacccccaacgtgtttttggtaggcgatgat
gaccaatcaatttttgaatttcagggtgcgcgcctcaaaaacctgacggacttttatgcc
aaataccagcacaacctgcatacggtagtgctcacggaaaactaccgctcggtacaaggg
tttttggatgccgccggtcaattgatccaaaacaaccaactgcgcatcatttcccatttg
caagccctgggattgaacaaaaacctggtggccgcagcagttaaaggtaaagctacaccc
ctgattagcgagtaccccaaccgcatcagtgaagagacggatattgtgcagcaaattgag
gcgctacaacaaaagggcattccactacaagagatcgccatcatttacgcccaacaccgc
caggtgcgcaacctactcggacttttagaaaaaaaaggcattccctaccaaacccgtcgc
gatgtaaacatcctggagttgccgctcatccagcgcttgcgcagcttgttggattacttg
caccacgaaaccttgcagccacattccggcgagttgcgtttgtttcaaatattgcacgcc
cattttctgggcatttctccgcttgacctggcgcgattgagcactcatctggcgcgtttt
cctgcggatgtgcgtccgccctggcgggaattgcttttggaccacgctgccttgggtgaa
ctgaacctggaaaaacccgcagtactgaccaattttgccatcttgctggaggagctgatt
gccgattgcctcaacgaacccctgcctaccctgctggaaaagctgttgaaccgctcgggc
tttttgcaatacatcctggaacagcccaaccacgcctggcaaatccaggtgctgcatact
ttttttcagtacgtgcgtgaagagtgccagcggcgaccgcattattccctggctgaactc
ctgcacaacctgcaccgcatggaggccaaccgcctgccgctggccctcagtcgcctgagt
gatgaccaggtgggcgtacatttgcttacagcgcatgccgccaaaggcctggagtttacg
gcggtgtttatgctggactgtgtcaaggattattgggagcctgcttcggggcgcaacagc
tatcggttcacgttgcccgaaaccctcacttattcgggtgaagaagacgctaccgaagcg
cggcgccgtttgttttatgtagcgctcacccgagcgaagacttttttacacttgtcttat
gcccggcaagatgattcggaaaaagaactgcaacgcgccctatatattgatgagctattg
agcacccaaaccctggcccttgaacaaaaggtgctgcccgccccgctggtgctcagtacc
caattgctgcgcctgcaagagcaacaaaaacccagcgttgcgccccaggatcggagcatg
atcgaggccattctgcgcaatttccggatgagcatttcggcgctgaatactttcctcaat
tgccccctggctttttattacgaatacatcctgaaagtgcccggcctgcacaacgaggct
acggcttatggcactgcggtacacaatgcactacaacggttgttcgaccgcatgttgctg
tcgcctcagcgtttgtttccttcggaaaaagaattgctgtacttttttgagcaagagctg
aaccgccagcggcaacaactttctctgccttcttttgaacgccgcctggaattgggcaaa
cgccaactggggcgttattaccaatattactatggccgttggcacaagcgggtacgggtg
gaatacaccattcggcaaatcgaagtggatggcgtacccctgacgggtaccatcgacaag
attgaattttacgaccagctccgcgtaggcatcatcgactacaaaaccgggagccacgac
gggacgaaattgcgtcgccccaccgacaccaatccatacggcggcacgtattggcggcaa
ttgttgttttacaaattgctgtacgagcattttgaccgttcttcacgccgcgtaacgttt
ggtgaaatcgcctatctggatcctaccccggatgggcaattcccggaagtgcgcctgagt
tttacgcccgaagacacggcttttatgcggcaaatgatccgggaggcgtatgcaaaaatc
cgcaagcatgagttttacgagggttgtgggaaggcgaattgtgcatggtgcaatttcgtg
aaacgggaagggggcgtggatcggattgaaagggttgtggtgggggaattggatgatagg
gggtga
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