Haliscomenobacter hydrossis: Halhy_2841
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Entry
Halhy_2841 CDS
T01491
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Halhy_2841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhy03019
]
Halhy_2841
Messenger RNA biogenesis [BR:
hhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Halhy_2841
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
V-ATPase_G_2
DUF4954
KH-I_KHDC4-BBP
KH_2
Cas3_HD
DUF1759
MreB-like_C
Motif
Other DBs
NCBI-ProteinID:
AEE50706
UniProt:
F4L347
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All DBs
Position
3620944..3622626
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AA seq
560 aa
AA seq
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MEIGIGAIIGLAIGVIAGYFLVQFFLNKSKQQKLEELNSQADLQIKEARLSAKRIVDEAE
TKAEKIVNQAESKNERIKQNKIQEAKDHFAKLKSDFDSRKTQQLVEMKEREMEIKALESE
FKSKEEKIDERHRVLEQQRAEFELKDAETMAIRENLEKQLKIVAKKREELDQANEIRIKE
LEIISRLSEQEAKEQLLDAVRAKAQNDAMSIVKESIEQAKMDANKEAKKIVIQTIQRMCA
EYTIENTVSVFHLESDDMKGQIIGREGRNIRALEAATGAEIVVDDTPEAIVISSFDPIRR
EVARLALKKLVADGRIHPARIEEVVAKTRKQLDEQIVEIGEKTVIDLDLHGLDPYLVKMV
GRMRFRSSYGQNLIKHSIETANLCAIMAAELGLKPQQIKLAKRAGLLHDIGKVAEEESEL
SHAILGMQLCEKYKENPAVVNAVGAHHDEIEMNNIISPIVQACDAISGARPGARREILES
YLKRIGELEDLAMTHEGVTKAFAMQAGRELRVIVESEKVTDQYADDLAFMISQKIQDEMQ
YPGQIKVTVIREKRAVAFAR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaaattggaataggagcaataatcggtttagcaatcggagtaatagcgggatatttt
ttggtgcagtttttcttgaataaatcgaagcaacagaaactagaagaactcaattcccaa
gccgacctgcaaatcaaagaagcccgcctatcggcaaaacgtattgtagacgaagccgaa
accaaggcagaaaaaattgtcaaccaggcggaaagcaaaaatgaacgcatcaaacaaaat
aagattcaggaagccaaagaccactttgccaaactgaaatcggattttgatagccgcaag
acgcagcaactggtggaaatgaaagagcgcgagatggaaatcaaagcgctcgaatcagaa
ttcaaatccaaggaagaaaagatcgatgaacgccaccgcgtgctcgaacaacaaagggct
gagtttgaactcaaggatgccgaaaccatggccatccgcgaaaacctggaaaagcaatta
aaaattgttgccaaaaaacgggaagagctggatcaagccaatgaaattcgcatcaaggaa
ctggagatcatctcgcgcttgagcgagcaagaagccaaggaacagcttttggatgctgtg
cgcgccaaagcgcaaaacgatgcgatgtcgatcgtaaaagaatccatcgaacaggccaaa
atggatgccaacaaggaggcgaaaaaaatcgtcatccagaccatccaacgcatgtgtgcc
gaatacaccatcgaaaacaccgtttcggtattccacctggaatctgacgacatgaaaggc
cagatcatcggtcgggaagggcgcaacatccgggcattggaagcggctactggcgcagaa
attgtggtagacgataccccggaagccatcgtgatttcgagctttgacccgatccgccgc
gaggtggctcgtctggccctgaaaaaactggtcgccgatggccggatccaccctgcccgc
atcgaggaagtggtggccaaaacccgcaaacaactggacgaacagattgtagagattggc
gaaaaaaccgtcatcgacctcgatttgcacggtctcgatccgtacctcgtgaaaatggtg
ggccggatgcgtttccgctcttcctacgggcagaacctgatcaaacactccatcgaaacc
gcgaatctttgtgccatcatggcggctgaattgggcctcaaaccccaacagatcaaactg
gccaaacgagcgggtctactccacgacattggtaaagtagctgaagaagaatcagaattg
agccacgccatcctggggatgcagttgtgcgaaaaatacaaggaaaacccggcggtagtc
aatgccgttggtgcccaccacgacgaaatcgagatgaacaacatcatctcaccgatcgta
caggcttgtgacgcgatctcgggcgcacgcccaggcgcacgtcgcgaaatcctggaaagt
tacctcaagcgcatcggtgagctcgaagacctggccatgacccacgaaggcgtaaccaaa
gctttcgccatgcaggctggccgcgagttgcgggtgattgtggaaagtgaaaaagtaacc
gaccaatatgccgacgatctggcgttcatgatttcccaaaagattcaggacgaaatgcag
tatcctggtcagattaaagtgacggtgattcgggagaagcgggcagtggcatttgcacgg
taa
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