Haliscomenobacter hydrossis: Halhy_3156
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Entry
Halhy_3156 CDS
T01491
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03030
DNA replication
hhy03410
Base excision repair
hhy03420
Nucleotide excision repair
hhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Halhy_3156
03410 Base excision repair
Halhy_3156
03420 Nucleotide excision repair
Halhy_3156
03440 Homologous recombination
Halhy_3156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhy03032
]
Halhy_3156
03400 DNA repair and recombination proteins [BR:
hhy03400
]
Halhy_3156
Enzymes [BR:
hhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Halhy_3156
DNA replication proteins [BR:
hhy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Halhy_3156
DNA repair and recombination proteins [BR:
hhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Halhy_3156
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halhy_3156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AEE51017
UniProt:
F4KQP4
LinkDB
All DBs
Position
3993009..3995816
Genome browser
AA seq
935 aa
AA seq
DB search
MSDKKLFLLDGHALVYRAHFAFITKPLVNSKGVNTSAINGFTRQLWDLMRTEKPTHIAVA
FDPHGPTFRHDMYEPYKANREEQPQDISIAIPWIKKIIEAMHIPIVMVQGYEADDVIGTL
AKQAEKEGYTVYMVTPDKDYGQLVSENIFMYKPSRQGNGIEIMGVKEVCENWGIKRVDQV
IDLLGLMGDAVDNIPGIPGVGEKTAAKLLDRFDTIEGVIANVNELKGKEKERVEQYAEQA
MLSKKLAIIETQVPIQFNADQYIIDPMNREALSEIFKELEFRSLATQILGEGETRPSTPG
PGQQGSLFGDTEPAIYTPQKGANLTAHSVAEKTIDNTPHEYHLVNSPEAMHKLAAELAQQ
SEFCFDTETTHVEPTQAELVGMSFAYKSGEAYYVPVPAGKENAQAVVEIFRPVLENEKIL
KIAQNLKYDAIVFKWYGVEVRGPYFDTMVAHYLLEPEMRHGMDYLAETYLSYSPISIEML
IGKKGKDQLNMSQIDLEKVTDYAAEDADITLQLKELFAPKLEEGGVQELFDTIECPLIKV
LADLEYEGIRIDSDYLDVYSKELEIQIQTLEQSIYEQAGVKFNIGSPKQVGDLLFERLKV
PYKGAKTKTGQYSTDEDKLLELAPEFPIIQTILNFRGLAKLKSTYVDALPKMVNPRTGRI
HSSFNQALAATGRLSSNNPNLQNIPVRTPEGAKVRRAFIPRDDQHTLLSADYSQIELRLI
ADISGDVAMLEAFQNNQDIHTATAAKVFNVPFDLVTREQRYQAKTVNFSILYGAGATNLS
RQLSIKRTEAKELIDAYFALYSGLKGYMVTVVEDARKNGYVTTLMGRRRYLREINSKSSL
ERSNAERVAVNTPVQGSAADMIKVAMVNIHQALLEQGLKTKMILQVHDELVFDVPNEELE
IVKPIIVEKMRSALPKLKVPIEVGLGTGQNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaaaactcttcctgctggacgggcacgcgctcgtataccgtgcgcatttc
gccttcatcaccaaacccctcgtcaactccaagggcgtcaatacctcggccatcaatggc
tttacccgccagttgtgggacctgatgcgcaccgaaaaacccacgcacattgccgtggct
tttgacccacacggccctacgtttcgacacgacatgtacgaaccctacaaggccaaccgc
gaagaacaaccccaagacatcagcattgcgattccctggatcaaaaaaatcattgaagcc
atgcacatccccatcgtgatggtgcaaggttatgaagctgacgacgtgattggcaccctg
gccaaacaggcagaaaaagaaggctacaccgtgtacatggttactcccgataaagactac
ggccaattggtgtctgaaaacattttcatgtacaaaccctcgcgccagggcaatggtatc
gaaatcatgggggtcaaagaagtctgtgaaaactggggcatcaaacgggtcgatcaagtc
attgacctcctcggtctgatgggtgatgcggtcgacaacatccccgggatacccggagta
ggtgaaaaaaccgccgcgaagttgcttgatcgttttgacaccatcgaaggcgtaattgcc
aatgtcaacgaactcaagggcaaggaaaaagaacgggtagagcaatacgccgagcaggcc
atgttgtccaaaaaactggccatcatcgaaacccaggtgccgatccagttcaacgccgat
cagtacatcatcgacccgatgaaccgtgaagccttgtcggagatttttaaagaactggaa
ttccgcagtctggccacgcaaatcctgggggaaggtgaaacccgccccagcacccccggc
cctggccagcagggttccttgtttggcgataccgaaccagcaatttatacccctcaaaaa
ggagccaacctgaccgcgcactcggtagctgaaaaaaccatcgacaataccccgcatgaa
taccacctggtgaacagcccggaggccatgcacaaactggcagcagaactggcgcagcaa
agcgagttttgttttgacaccgaaaccacccacgtagaacctacccaagctgaattggtg
ggcatgtcttttgcctacaaatcgggggaagcctactatgtgcccgtacccgcaggcaag
gaaaatgcccaggccgtggtggaaattttccggccagttttggaaaatgaaaaaatcctc
aagattgcccaaaacctcaaatacgacgccattgtgttcaaatggtacggcgtggaggtg
cgcgggccctacttcgataccatggtggcccactacctcctggagccggaaatgcgccac
ggtatggattacctggccgaaacttacctgagctattcacccatttcgattgaaatgttg
attggcaaaaaaggcaaggatcagctcaatatgagccagatagacctggaaaaagtaacg
gattacgctgccgaagatgccgacattaccttgcagttgaaagagctttttgcaccaaaa
ctggaagagggcggcgtgcaggaactttttgataccatcgagtgccccctgatcaaagta
ttggccgatctggaatacgaaggcatccgcatcgacagcgattatctggatgtgtattcc
aaagaactggaaatacaaattcaaaccctggagcaatccatttacgaacaagccggggtc
aagttcaacatcggttcacctaaacaggtaggtgacctgctttttgaacgcctgaaagta
ccctacaaaggggctaaaaccaaaaccgggcaatattctaccgacgaagacaaactactg
gaactagcacctgaatttcccatcatccaaaccatactgaacttccgggggcttgccaag
ctcaaatcgacttacgtagacgcgttgcctaaaatggtcaatccccgcaccgggcgtatc
cattcctcattcaatcaggcactggctgctaccgggcgtttgagttcgaataaccccaac
ctgcaaaacatccccgtgcgcacccccgaaggagccaaagtgcgccgcgccttcatccca
cgcgatgatcagcatacccttttgtcggcggattattcccaaatcgaactgcgcctgatt
gccgacatcagtggcgacgtggccatgctagaggctttccaaaacaaccaggatatccat
actgccaccgctgccaaggtgttcaacgtacccttcgatctagtgacccgcgagcaacgc
taccaagccaaaaccgtcaactttagtattttgtacggtgcaggggcaaccaatctctcg
cgtcaattgagcatcaaacgtacggaagccaaagaattaattgatgcctacttcgcgctt
tatagtggcctaaaaggctacatggtcaccgtggtagaagatgcccgtaaaaatggctac
gtcaccacgctgatgggccgccgccggtacttgcgggagatcaactccaaaagttcactt
gaacgcagcaacgccgagcgggttgcggtgaacactccggtgcaaggctccgccgccgat
atgatcaaagtggcgatggtcaatattcatcaagcgcttttggagcaaggcctaaaaacc
aaaatgatcctgcaggtacatgacgaattggtatttgatgtgcccaacgaggaattggaa
atcgtgaagccgatcattgtggaaaaaatgcgcagcgccctgcccaagttaaaagtgccc
atcgaagtgggccttggcaccgggcagaattggctggaagcacattaa
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