Haliscomenobacter hydrossis: Halhy_5180
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Entry
Halhy_5180 CDS
T01491
Name
(GenBank) sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
hhy
Haliscomenobacter hydrossis
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhy03000
]
Halhy_5180
Transcription factors [BR:
hhy03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halhy_5180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
PAS_3
PAS_4
AAA_2
AAA_5
AAA
Mg_chelatase
HTH_8
PAS_8
AAA_3
AAA_7
nSTAND3
IstB_IS21
DUF815
MCM
AAA_16
AAA_19
bpMoxR
AAA_22
Microtub_bd
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AEE53006
UniProt:
F4L4Q8
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All DBs
Position
6600456..6602573
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AA seq
705 aa
AA seq
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MLDIYLGASELLQSAAVWLASDGRILGVNALFASELGYPQEDLKGKSIFQINPHLNLMEW
KKIWKALENSGQTDIESDHITANGKLYPIRMKAVMVDIGLEKVCIGIVKNLMELTRYKDM
LELVTGMAKIGSYELDLVSDELVTTEEFYRVLGLEKVTHPMTRDDFRLLIKQHLVPEELI
NLDNKTDLAIRDGISTETTFTITTKNKEVKHLKLYVYPLSKEGITYKIYGAVQDITQQRA
TVQPLELVKFLIDNATEMIYWVKRDGKVRYSNYAFVERMGYTMEEITELHIHDLVPDVVE
IGWENLFDLLREKKHLVIERNKRCKDGSFFPAQVVANHVEYNGESFICKYVRDLSDIRKT
EAELRQAVQEISELKRQLELENSYLQSEIEIEYNFNNIITASESYKTVLQQVQQVAHTDA
TVLITGETGTGKELLARAIHSNSARSKKQMIKVNCAALPESLIESELFGHEKGAFTGAIQ
KKPGRFELAHQSTIFLDEIGEMSLDVQAKLLRVLQEGEFERVGGSETLQCDVRVIAATNR
NLEQMIAEGKFRRDLYYRISVFPIHNIPLRERKEDIALLIRHFVKKFSIKTGKNIDKIPR
RVFDILEEYCFPGNIRELENIIERSVILSHQQTLSFDIIPFKKGEKSIVEENGSFKSLEE
IQREHILNALKKTQGRVSGPSGAARLLGLNDKTLFSKMAKLGINE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttagacatttatttgggcgcttcagagctcttgcaaagcgcggcggtttggttggcc
tctgatggccggattttgggggtcaacgccttgttcgcttcagaattgggatacccccaa
gaagatttgaaaggaaagtccatctttcaaatcaatccgcacctcaatttgatggaatgg
aagaaaatttggaaagcgttagaaaactccgggcaaactgacattgagtcggaccacatc
accgcaaatgggaaattgtaccccatccggatgaaagcggtgatggtagacattggtcta
gaaaaggtttgtattggcatcgtcaaaaacctgatggagctgacccgctataaagatatg
ctggagttggtgactggcatggctaaaattggatcttatgaactggatctggtaagtgat
gaactggtcacaaccgaagaattttaccgcgttttggggttagagaaagttacgcaccct
atgaccagagacgattttcgcctgctgatcaaacagcaccttgtgcccgaagagctgatt
aatttggacaacaaaaccgacctggccatcagggacggaatttctaccgaaacgacgttc
accattacgaccaaaaataaagaagttaaacaccttaagttatacgtttatccgcttagc
aaggaagggataacctacaaaatttatggcgcggttcaggacattacccaacaaagagca
acggttcaacccttggaactggtcaaattcctgatcgacaatgccaccgaaatgatttat
tgggtaaaaagggatggaaaagttcggtattccaattatgcctttgtggaaagaatgggg
tacaccatggaggagataaccgaattacacatccacgatttggtgcctgatgtagtggaa
atcggttgggaaaacctttttgatcttttacgagaaaaaaagcatttggtcattgagcga
aacaaacgctgcaaagatgggtcatttttccccgctcaggtcgtggccaatcatgtggag
tacaacggtgaatctttcatttgcaaatatgtacgtgacctgagtgatatccgcaaaact
gaagctgaattgcgtcaggctgttcaggaaatttcagaactaaaaagacagttggaattg
gaaaacagctatttgcaaagtgagattgaaattgagtacaacttcaacaacatcatcacc
gcaagtgaaagttacaaaacagtactgcagcaggttcaacaggttgcgcatacggatgca
acggtattgatcactggagaaacaggcacgggtaaagaactcctggctcgggccatccac
agcaatagtgcacgcagtaaaaaacaaatgatcaaagtgaactgtgctgcactgccggaa
agtttgatcgaaagtgaattgttcggccacgaaaagggcgcgtttaccggagccatacaa
aagaaacctggccgctttgaattggctcaccagagtaccattttcctggacgaaatcggc
gagatgtcacttgacgttcaggcaaaattgctgcgggtgctacaggaaggagaatttgaa
cgggtaggtggatcggaaacattgcaatgcgatgtacgggtaatcgctgcgaccaaccgc
aatcttgaacaaatgattgcggaaggaaagtttcggcgggatttgtattaccgcattagc
gttttccccattcacaatattccactccgcgaacgcaaagaagacattgccttattgatt
cgacactttgtgaaaaaattttccatcaaaacgggtaaaaacattgacaaaatcccccgt
agggtatttgatattttagaggaatattgcttcccgggtaacatccgcgagttggaaaac
atcatcgaacgttcggtcatccttagtcatcaacagaccttgagttttgatatcataccc
ttcaaaaaaggagaaaaatcaattgttgaagaaaatggctcgtttaaatctctggaagaa
attcaacgtgaacacatccttaatgccttaaaaaagacccagggaagggtaagtggcccc
tctggtgcagcgcgtttgttgggattaaacgataaaaccttattctcgaaaatggcaaaa
ctggggataaacgagtaa
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