Haliscomenobacter hydrossis: Halhy_5346
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Entry
Halhy_5346 CDS
T01491
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy03030
DNA replication
hhy03430
Mismatch repair
hhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Halhy_5346
03430 Mismatch repair
Halhy_5346
03440 Homologous recombination
Halhy_5346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhy03032
]
Halhy_5346
03400 DNA repair and recombination proteins [BR:
hhy03400
]
Halhy_5346
Enzymes [BR:
hhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Halhy_5346
DNA replication proteins [BR:
hhy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Halhy_5346
DNA repair and recombination proteins [BR:
hhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Halhy_5346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
ExoX-like_C
DNA_pol_B_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AEE53171
UniProt:
F4KPW7
LinkDB
All DBs
Position
complement(6813301..6814149)
Genome browser
AA seq
282 aa
AA seq
DB search
MKLILDRDLCFFDIEATGLNVVRDRIVQIAIIKYFKDGREPQELSLMINPGIPISLEAIL
VHGIQPKDVANKPTFQQLAQKIWDFIGNADLAGYNSNRFDIPMLMEEFARVGMEFDVTKR
RSIDVQRIFYKMEPRTLKAALKFYCEKEHEDAHDAMADVRATIDVFKGQLDKYEGVDYLD
EDGVRVEAPIKNDVQVLHEFTNDNRFVDATQKLRADVNGDIVFNFGKYVGKPVGETLYED
RQYYNWILNKEFTSQVKQMVKKLVREYEKGLKAKEKENGNNE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgattctcgaccgcgatctctgttttttcgatatcgaagccaccgggcttaat
gtggtgcgcgaccgcattgtgcaaattgccatcatcaaatatttcaaagatggccgtgaa
ccgcaggaattgtcgttgatgatcaatccgggcattcccatttcactggaagccattttg
gttcacggcattcaacccaaggatgtcgccaacaagccaactttccagcaattggcacaa
aagatctgggacttcattggcaatgccgacctggcgggctacaattctaaccgcttcgac
atcccaatgttgatggaagaattcgcccgcgtgggtatggaattcgacgtcaccaaacgc
cgctcaattgacgtacagcgcattttttacaaaatggagccccgtacgctgaaagcggcc
ctcaagttttactgcgaaaaagaacacgaggacgcccacgatgccatggccgatgtgcgt
gccaccattgatgtgttcaaagggcagttggacaagtacgaaggtgtggattacctggat
gaagatggggttagggtagaagcccccatcaaaaatgacgtacaagtcttgcacgaattt
accaatgacaaccgttttgtagatgccacccaaaagctgcgcgccgatgtcaatggcgac
atcgtgttcaactttggaaaatacgtcggcaaacccgtcggtgaaaccctgtacgaagac
cgccaatactacaattggatcctcaacaaggagttcacctcgcaggtcaaacaaatggtc
aaaaagctggtacgcgagtacgaaaaaggcttaaaagccaaagagaaagaaaacggaaac
aatgaataa
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