Haliscomenobacter hydrossis: Halhy_5393
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Entry
Halhy_5393 CDS
T01491
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhy
Haliscomenobacter hydrossis
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhy03032
]
Halhy_5393
03400 DNA repair and recombination proteins [BR:
hhy03400
]
Halhy_5393
Enzymes [BR:
hhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Halhy_5393
DNA replication proteins [BR:
hhy03032
]
Prokaryotic type
DNA Topoisomerases
Halhy_5393
DNA repair and recombination proteins [BR:
hhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halhy_5393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
AEE53218
UniProt:
F4KQ14
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All DBs
Position
6867861..6870452
Genome browser
AA seq
863 aa
AA seq
DB search
MSKNLLIVESPAKAKTIEKFLGKDFAVRSSYGHVRDLDKGNQAVDVKNGFSPKYTISPEK
HKVVKELKDWVKKVDEVWLATDEDREGEAISWHLCEVLGLDPKSTKRIVFREITKPAIEK
AVQQPRTVDLNLVNAQQARRVLDRLVGFELSEILWKKVKGKLSAGRVQSVAVKLVVEKER
EINSFKSEAYFKIEALFDVKNEQGRTVSLKAEGTDRIKTEMDAETFLKKCIGAAYKIQSI
DVKPLKRRPTAPFTTSTIQQEASRKLGFSVNRTMVTAQKLYEAGFITYMRTDSINLSETA
IASISQEIEKLFGKKYVEVRRFKGKSANAQEAHEAIRPTYIENQTVPGDRDEKRLYELIW
KRTIASQMADAELEKTVVDIGISTQPGVSLQAEGEVLKFDGFLKVYLESNDDDEEDEAQG
VLPPLKVGQVLPFNQMKATERFTRPPSRYSEAGLVKKLEELGIGRPSTYAPTISKIMEEG
RGYVVKENRDGAPRAFRELTLKDAQISKKELSEMTGVIKGRLFPTDMGSTVSDFLDQHFD
KIMDYKFTAEIEKLFDDIAAGSREWTEMLGTFYWPFHEIVEETMANADRPTRERILGKEE
GTGYSVLTRMTRLGPVVQIGTPEELIPGEKPRYANLKPGQSIETIEMEEAMKLFELPKIL
GDYRSQEVAVGTGRYGPYVRFGEKFISIPKGEDPLSVTLERALELIEEREKVDAPVASYK
GFPITKGTGRFGPFIKWNDTFINVPKKYNLETLTPEEMHELIEGKMEKEANRYIQNWPDE
KISIENGRWGPFIRFKKDMLKLPRLDGQKMSPEDAALLSLEDVKKTIEEQVPDAFAKKAP
VKKAPAKKAAPKAAAAKGAKVKK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaacttgctcattgtagaatcgcctgccaaggccaaaacgatcgaaaagttc
ctgggaaaggacttcgcggtgcgttcgagctacggacacgtgcgagacttggacaagggc
aatcaagcggtggatgtaaagaatggtttttccccaaaatacaccatttctccagagaag
cacaaggttgtcaaagaactaaaagattgggttaagaaggtggacgaagtgtggctagcc
acggacgaagaccgcgaaggagaggccatttcctggcatttgtgtgaggtcttgggcttg
gacccaaaatcaaccaaacgcatcgtctttcgcgaaatcaccaaacccgccatcgaaaaa
gcggtccaacaaccccgcacggttgacctcaatctggtcaacgcccaacaagcccggcgg
gtattggatcgactggtcggatttgaactctcggaaatcctctggaaaaaagtcaaaggc
aaactttcggcaggccgggttcagtcagtagcggtaaaattggtcgtcgaaaaggagcgt
gaaatcaacagcttcaaatcggaagcctactttaaaatagaggccttgttcgatgtaaag
aacgaacaaggccgtacggtgagccttaaagccgaaggaaccgatcggatcaaaaccgaa
atggatgccgagactttcctgaaaaagtgcattggtgcagcatacaaaatccaaagcatc
gacgtcaaacccctcaaacgccggcccactgcaccttttaccacgtctacaatccagcaa
gaagccagccgcaagttgggcttttcggtaaaccgcaccatggtgaccgcccaaaaactg
tacgaagcgggtttcatcacttacatgcgtaccgactcgatcaacctcagcgaaacggcg
attgcttccatttctcaggagatcgaaaaattgtttggtaaaaaatacgtcgaagtgcgg
cgcttcaaaggcaaatctgccaacgcacaggaagcccacgaagccattcgccccacgtac
atcgaaaaccaaaccgttcctggagaccgtgatgaaaagcgcctgtacgaactgatatgg
aagcggaccatcgcctcacaaatggctgatgcggaattggaaaaaaccgtggttgacatt
ggcatttctacccagcctggcgtgagcctgcaagcggaaggagaagtgttgaagttcgac
ggctttttgaaagtttacctcgaatccaacgacgacgacgaggaagacgaagcccagggc
gttttgcctcccttgaaagtaggccaggtgctgccgttcaatcaaatgaaggccaccgag
cgttttacccgcccgccatcgcgttattcggaagcgggtttggtgaaaaaactggaagaa
ttgggcattggtcgcccttccacctatgcgccgaccatcagcaagatcatggaagagggt
cgggggtacgtggtcaaagaaaaccgcgacggtgccccacgtgctttccgcgagttgaca
ctcaaggacgcgcaaatcagcaaaaaggaattgtcggaaatgactggcgtcatcaaaggc
cgtttgtttccgaccgatatgggcagtacggtgagtgattttctggatcaacatttcgat
aaaatcatggactataagttcacggctgaaatcgaaaagctgttcgacgacattgccgct
ggtagccgcgaatggaccgaaatgttgggaaccttctattggcctttccacgaaattgtg
gaagaaacgatggccaacgccgatcgccccacccgcgagcgcatcctgggcaaagaggaa
ggaaccggttattcggtgcttacccgtatgacccgcctggggccggtggtacaaatcggt
acccccgaagagttgatccccggcgaaaaaccccgttacgcgaacctcaaacccggtcaa
tccatcgagaccatcgagatggaagaagccatgaagttgtttgaattgcccaagattttg
ggggattaccgcagccaggaagttgcagtaggtaccggacgttacggcccgtatgtgcgc
tttggggaaaaattcatctccatacccaaaggggaagacccactttcagttaccttggag
cgtgctctggagctgattgaagaaagggaaaaagtggatgcacccgtagccagttataaa
ggtttccccatcaccaaaggcactggacgttttggtccctttatcaagtggaacgatacc
tttatcaatgtacccaaaaagtacaacctggagaccctcacccccgaagagatgcacgaa
ctcatcgaaggcaaaatggaaaaagaagccaatcgctacatccaaaactggccagatgaa
aaaatcagcatcgaaaatggccgttggggacctttcatccgttttaagaaagacatgttg
aagttgccgcggctggatggccaaaaaatgagccctgaagacgccgcactactttcgctg
gaagatgtgaaaaaaaccattgaagaacaagttcccgatgcttttgccaaaaaagcgccc
gtaaaaaaggcacctgctaaaaaagcagcaccaaaagcggcagcggcgaagggagcgaaa
gtaaaaaaataa
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