Haliscomenobacter hydrossis: Halhy_6074
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Entry
Halhy_6074 CDS
T01491
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hhy
Haliscomenobacter hydrossis
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhy03016
]
Halhy_6074
Enzymes [BR:
hhy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Halhy_6074
Transfer RNA biogenesis [BR:
hhy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Halhy_6074
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEE53896
UniProt:
F4L2H8
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All DBs
Position
7759141..7760328
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AA seq
395 aa
AA seq
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MQAFEFITTKEGLDNFRQVNDDIEWMCFDSEFVGEKRFTTRLCLIQVATRHGLFLIDPFP
LKNLDPFLEMIENPNIVKVTHAGENDYRLLYASFGTIPKNTFDTQIAAGFLGYRYPLAFK
KLVETELKINMNKSFTVADWEARPFNQNQLKYAIQDIEPLYDLWKMQEADLLRKKRLHWA
EEEFKVLERESYYAKEPHYEALNSDLMKSLNKRERLFLLRLFEWRRNTAEDKNYSKEMVL
PSKFMSQIVRSMRSGRAGLRENRRIPDKFAGDLWPVMNELYSREISEEERMLLLMVPSEE
DENANEEILTEFLYLVIRHQCMQNGISHSLALPRNWFKKIKNDPSFAEEVFGQGWRKELF
GDTFVRWLSQPDNLSIVIKPDVIELRLSGNEGKES
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttgaatttattaccactaaagaaggactggataattttcgtcaggtcaac
gatgatattgaatggatgtgtttcgattcggaattcgttggagaaaaacgatttacgacc
cgtttgtgcctcatccaggtagctacccgtcacgggttgtttttgatagaccccttccct
ttaaaaaatttggatccatttttggaaatgatcgaaaacccgaacatcgtcaaggttacc
cacgccggggagaacgattatcggcttttgtacgcctcatttggcaccatacccaaaaat
actttcgacacccaaattgccgcgggctttttggggtaccgctacccacttgcctttaaa
aaactggtggagacggagttgaaaatcaacatgaacaaaagttttacagtagcggattgg
gaggctcggcctttcaaccaaaatcagctcaagtacgccattcaggacattgagccattg
tacgacctttggaaaatgcaggaagcagatttgttgcgaaaaaaacgtttgcactgggct
gaagaggaattcaaagtgttggagcgggaaagttattacgccaaagaaccccattacgag
gcgctcaacagcgacttgatgaaatcactcaacaaacgtgaacgcctgtttttgttgcgt
ttgtttgaatggcgacgcaataccgccgaggacaaaaactactctaaggaaatggtattg
cccagcaaattcatgagccagatcgtgcgcagtatgcgctcaggccgggcgggattgcgg
gaaaaccgccgcattccagacaaatttgccggagacctctggcccgtcatgaacgagctg
tacagccgcgaaatcagtgaagaggagcggatgttgttgctcatggtgcctagcgaagaa
gatgaaaacgcaaatgaggaaatcttgaccgagtttctttacctcgtcattcggcaccaa
tgcatgcaaaatgggatttcacattccctggccttaccgcgcaattggttcaaaaaaatc
aaaaatgacccctcttttgctgaggaagtatttggccaaggctggcgcaaagaactattt
ggcgatactttcgtccgctggttgagccaaccagataacctgagcatcgtaatcaagccg
gatgtgattgagttgcggctctctggaaatgaaggaaaggaaagttga
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