Haemophilus haemolyticus: NCTC10839_00367
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Entry
NCTC10839_00367 CDS
T06216
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hhz
Haemophilus haemolyticus
Pathway
hhz03030
DNA replication
hhz03430
Mismatch repair
hhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10839_00367 (dnaE)
03430 Mismatch repair
NCTC10839_00367 (dnaE)
03440 Homologous recombination
NCTC10839_00367 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhz03032
]
NCTC10839_00367 (dnaE)
03400 DNA repair and recombination proteins [BR:
hhz03400
]
NCTC10839_00367 (dnaE)
Enzymes [BR:
hhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10839_00367 (dnaE)
DNA replication proteins [BR:
hhz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10839_00367 (dnaE)
DNA repair and recombination proteins [BR:
hhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10839_00367 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SQH96516
UniProt:
A0A2X4R3H5
LinkDB
All DBs
Position
1:complement(355879..359358)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSQPRFVHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVRFYGEMLS
SGMKPIIGADVKVKNALCGNEMFDLTLLAKNNEGYKNITLLLSKAYQRGYDDYPYIDQNW
LIEHREGLIILSGGTQGDVGKKLLKENAAEIESAVAFYQEFFADHFYLALTRTGRPDEER
YIQAALKLAKSHGLPLVAMNDVMFLKSDDFEAHEIRVAIRDGYTLDDPKRPKRYTPQQYF
RSEDEMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKAKEGL
EERLAFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LQTAYDSDEEVQALIDMARKLEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDMINARMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRSVFKEGAEKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVTARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAMGQTDMFGVLTETHEEVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVVASRIAMTKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVIVASGQVSFDDFSGGLKMTVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQLKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccagcctcgtttcgtccatcttcgcacgcacacagatttttcgatgattgac
agtattgtcaaagtgaaacctctcgtgaaagcttgtgccgccaatgaaatggtcgctatg
ggattaacggattttactaatttttgtggtgtggtgcgtttttatggcgaaatgctttct
tcgggtatgaagccaattattggcgctgacgttaaagtgaaaaatgcactatgcggtaat
gaaatgtttgatttgacgcttttggcgaagaataacgaaggctataaaaacattacatta
ttgctctcaaaagcctatcagcgcggttacgatgactatccttatatcgatcaaaattgg
ttaatagaacaccgagagggtttgattattttatctggtggcacgcaaggcgatgtgggt
aaaaaattgttgaaagaaaacgcagcagaaattgaaagtgcggtcgctttttaccaagaa
ttttttgctgatcatttttatcttgcacttacgcgcacaggcagacctgatgaagaacgc
tatatccaagctgcattaaaattagctaaaagtcatggattgcctttagtggcgatgaac
gatgtgatgtttttgaaatctgatgattttgaggctcatgaaattcgtgttgcgattcgt
gatggctatacattagatgatcctaaacgtccaaaacgttataccccacaacaatatttc
cgtagcgaagacgaaatgtgcaagttattcgctgacattccttccgctctcgaaaatacc
ttattaattgcgcagcgttgtagtgtgactttgcgccttggtcagtatttcttacctcaa
tttccgactggagatttaagtacagaagatttcttggtgcaaaaagctaaagaaggtttg
gaagaacgtttagcttttttattccctgacgaaaaagtgcggttagaaaaacgaccaaaa
tatgatgaacgtttgcaagttgagctggatgtgattaaccaaatgggattcccaggttat
ttcttgatcgtaatggaatttattcagtggtcgaaagataacgacattcctgttgggccg
ggtcgtggttctggcgcgggttcattagtggcttacgcattaaaaatcactgatttggat
ccgctagagtttgatttgctatttgaacgttttttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggatggtcgagaccgagtgattgaacacgttgctgaa
acctacggtcgtggcgcggtatcacaaattatcacctttggaaccatggcggcgaaagcc
gttattcgtgatgtggggcgcgtattggggcatccgtatggtttcgttgatcgtatttcg
aaattaattccaccagatcctggtatgacgcttgcgaaagcatttgaggctgagccacaa
ttacagaccgcctacgatagcgatgaagaagtgcaagcgttgattgatatggcgcgcaag
ctggagggcgtgacacgtaatgcgggtaaacatgctggtggtgtggtcatttcgccaacc
ctaattactgattttgcaccgctctattgtgataatgaaggcttacatcctgttactcac
tttgataaaaatgatgtggaatatgcggggcttgtgaaattcgacttcctaggcttgcgt
actctcaccatcattaaatgggcattggatatgattaatgctcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatccagaatcttttgaattactt
aaacgttccgaaaccacagccgtgttccagctggaatcgcgcggaatgaaggatttgatt
aagcgcctgcaacctgactgttttgaagatatcatcgcgttggtggcattgttccgtcct
ggtccgctgcaatcaggcatggtggataactttatcgaccgtaaacatggacgagaagaa
gtatcttaccctgatgcagaatatcaacatgaaagcttaaaacctattcttgagccgacc
tacggtattattttgtatcaagaacaagttatgcaaattgcacaggtgttggctggctat
accttgggtggggctgacttattgcgtcgtgcgatgggtaagaaaaagccagaggaaatg
gcaaaacagcgttctgtgtttaaagagggggctgagaaaaacggcgttgatggtgagtta
tccatgaagattttcgacttagtggaaaaatttgctggctatggttttaataaatctcac
tccgctgcttatgccttggtatcttaccaaaccctttggctcaaaacccatttccctgca
gaatttatggcagcggtaatgacatctgaaatggataacacggataaaatcgtagggttg
tacgatgaatgtttacgtatgggcttaaaagtgacacctcccgatattaatatcggtaaa
caccattttagcgtcaatgaacaaggcgaaattgtgtatggtattggtgcgattaaaggt
gtgggggaaggcccgattgaagcacttgtgacggctagaaatgaagggggcattttcaaa
gatttatttgacttatgcgctcgtgtagatttgaaaaaaattaaccgtcgtacctttgaa
agcctaattatgtcgggcgcttttgataaattaggcccacatcgcgccgcactttctaag
aatttagaagatgcgcttagagcttccgatcagcatgctaaagatgaagcaatggggcaa
acggatatgtttggtgtgctgactgaaacccatgaagaagtggaaaatgcctacgccaat
acaccgccttataccgaaaaacaaatccttgatggtgaacgagaaaccttggggctttat
ttaagcagccatcctgttagccgttatttgaaagaactttctcattacacttcaactcgc
ttaaaagatcttgcaccaaatcgccgtggacaaattagcactgtagcggggctagtcgtg
gcatcgagaattgcgatgacgaaaaaaggcaatcgtctaggtattgctacattggacgac
cgttcaggtcgcttagatttaacattatttggtgaaagtctagaacaatttggtgagaaa
ttacaaaaagatacagtgattgtggcttctgggcaggtgagctttgatgatttctcaggt
ggcttaaaaatgacggtgagagagttaatgaccttagatgaggctcgttctcgttatgtc
aaatccttagctatcagcctttctgagcatcaaattacaccaagtttcattaaacaactt
aaagcattacttgagcctgttagtggtggaacgttgccgattaacgtgtattaccaaagc
ccgaaaggtcgtgcgttgttacgtttgggcgtgcaatggtcgatcattccaacagatgaa
attctgacggaattggtgaatttacttggcgaaagtgcggtggaattagagtttgaataa
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