Haemophilus haemolyticus: NCTC10839_00434
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Entry
NCTC10839_00434 CDS
T06216
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hhz
Haemophilus haemolyticus
Pathway
hhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10839_00434 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhz03019
]
NCTC10839_00434 (recQ)
03400 DNA repair and recombination proteins [BR:
hhz03400
]
NCTC10839_00434 (recQ)
Enzymes [BR:
hhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10839_00434 (recQ)
Messenger RNA biogenesis [BR:
hhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10839_00434 (recQ)
DNA repair and recombination proteins [BR:
hhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10839_00434 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HEM4
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
SQH96579
UniProt:
A0A2X4R2R5
LinkDB
All DBs
Position
1:complement(429149..431008)
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AA seq
619 aa
AA seq
DB search
MLDSHLSPKIIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCY
QIPALCFEGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLERQQQVQNKLISGQLK
LLYVSPEKVMTNSFFQLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPI
MALTATADYATRQDILTHLKLENPHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGK
SGIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETTLRERVQQDFQRDNVQVVVATIAFG
MGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILLEKPE
TPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPCNNCDICLDPPKKYDGLVDAQ
KVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKSKEHWQSVIRQLI
HLGFVQQVISELNPTLQLTESAKAILKGEEPLELAMPRISAISKIAHNPQRQGVANYDKD
LFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQP
FMALIQEHKAILAKAQNNE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcttgattctcatttatcaccaaaaataatagaaaaaccgaccgcactttctgttttg
aaatcggtttttggttatcaatctttccgtaaagggcaggaagaagtcatcaatgccgct
ttaaacggacaagatgctttggtggtaatggcaacggggaatggcaaatcgctttgttat
caaattcccgcgctttgttttgagggattaactttagtgatttctccgctgatttccttg
atgaaagatcaagtagatcagcttcaagctaatggaattgaggcggattttcttaattct
agtcagactttagaacggcagcaacaagtacaaaataaactgatttctgggcaacttaaa
ctgctttatgtgtcgccagaaaaagtgatgacgaacagtttctttcaacttatttcttat
agtaaagtcagctttattgcgattgatgaagcacactgcatttctcaatgggggcatgat
tttcgccctgaatatacccagcttggcggtttaaaagctagtttccctcatgcgccgatt
atggcgctcaccgcaacagccgattatgccactcgccaagatattttgactcacctcaag
ctagaaaatccgcataaatatataggtagttttgatcgaccaaatattcgttatactttg
gaagaaaaatataaaccaatggagcaactgacacgttttgtgttagctcaaaagggcaag
agtgggattatttattgcaacagccgaaacaaggttgagcgaattgcggaaagtttacgt
aataaaggcgtctctgctgctgcttaccacgcgggaatggaaacgacactgcgtgagcgt
gtgcaacaggattttcagcgtgataatgttcaagtagtcgtcgcaaccattgcttttgga
atggggattaataaatccaatgtgaggtttgttgcccattttgatttaccacgtagcatt
gaatcttactatcaagaaacagggcgagctggacgtgatgatttacctgcagaggccgtt
ttgttttatgagccggcggattacgcttggttacaaaaaattctcttagaaaaaccagaa
acgccacagcgtcagattgagcagcataaattagaagctattggtgaatttgcagaaagc
cagacttgtcgtcgtttagttcttctcaattattttggtgagcatcgacaaacaccatgc
aataactgtgatatttgccttgatcctcctaaaaaatatgatggtttagttgatgcgcaa
aaagtaatgtctactatttatcgagtggggcaatgtttcggtgctcattatgtgattgcg
gtgttgcgtggaatgcacaatcagaaaattattgaacgccaacatgataaactttcagtg
tatggtatcggaaaagataaaagcaaagagcattggcagtctgttattcgtcagcttatt
catttaggttttgtgcaacaggtcattagcgaattaaatccaacattgcaacttactgaa
agtgcaaaagcgattctgaaaggtgaagaaccattagaactggcaatgcctcgtatttct
gcaatcagtaagattgcccataatccacaacgtcaaggtgttgcaaattacgataaggat
ttatttgcacgcttgcgtttcttacgcaaacaaattgccgataaagaaaatattccgccg
tacattgtctttaatgatgcgactttgcaagaaatggcacaatatatgccaacaagcaat
attgaaatgctgcaaattaatggcgtgggctctatcaaattagagcggtttggccagcct
tttatggcattgattcaggaacataaagcaattttggcgaaagcgcaaaataatgagtaa
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