Haemophilus haemolyticus: NCTC10839_00630
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Entry
NCTC10839_00630 CDS
T06216
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
hhz
Haemophilus haemolyticus
Pathway
hhz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10839_00630 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhz03021
]
NCTC10839_00630 (rpoB)
03400 DNA repair and recombination proteins [BR:
hhz03400
]
NCTC10839_00630 (rpoB)
Enzymes [BR:
hhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10839_00630 (rpoB)
Transcription machinery [BR:
hhz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10839_00630 (rpoB)
DNA repair and recombination proteins [BR:
hhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10839_00630 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
FAM133
FapA
Motif
Other DBs
NCBI-ProteinID:
SQH96761
UniProt:
A0A2X4R4L5
LinkDB
All DBs
Position
1:630888..634916
Genome browser
AA seq
1342 aa
AA seq
DB search
MGYSYSEKKRIRKDFGKRPQVLNVPYLLTIQLDSFDKFIQKDPEGQQGLEAAFRSVFPIV
SNNGYTELQYVDYRLEEPEFDVRECQIRGSTYAAGLRVKLRLVSYDKESSSRAVKDIKEN
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTEEILNLFFDKITFEIAGDKLLMT
LVPERLRGETASFDIEANGKVYVERGRRITARHIKALEKDKISQVVVPSEYILGKVASKD
YVDLESGEIICPANGEISLETLAKLAQAGYTTIETLFTNDLDYGPYISETLRVDPTYDKT
SALYEIYRMMRPGEPPTPESSEALFNNLFFSAERYDLSAVGRMKFNRSLAIVEGEGAGIL
SNEDIIAVMRKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLS
LGDLDAITPQDLINPKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHNTHYGRLCPIETPEGPNIGLINSLSAFARTNDYGFLETPYRKVVDGQVT
EEIEYLSAIDEANYIIAQANSNLDENNRFTDAFVTARGERGESGLYKPEDIHYMDVSTQQ
VVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAVVAK
RGGTVQYVDASRIVIKVNEDETIAGEAGIDIYNLIKYTRSNQNTCINQIPCVNLGDPINR
GEVLADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQQDRFTTIHIQELSCV
ARDTKLGAEEITADIPNVGESALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVEKDKRALEIEEMQLREAKKD
LTEELEILEAGLFARVRNLLISSGADAAQLDKLDRTKWLEQTISDEEKQNQLEQLAEQYE
ELRKEFEHKLEVKRKKIIKGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKI
NPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAKGIGDQINAMLKQKQEVE
KLRGYIQKAYDLGNGSQKVDLSTFTDEEVLRLAENLRKGLPVATPVFDGAAEAEIKELLK
LGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVSGNQHMDPGTP
ESFNVIMKEIRSLGLNIELDEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgggttactcctattctgaaaaaaaacgaattcgtaaagatttcggtaaacgtccgcaa
gttttaaatgttccttatttattaaccattcagttggattcttttgataaatttattcaa
aaagatcctgaaggtcagcaaggtttagaagcggcattccgttctgtattccctattgta
agcaataatggctatacagaattacaatatgtagattatcgtttagaagaacctgaattt
gatgtacgtgagtgccaaattcgtggctcaacttatgcagcaggcttacgtgtaaaatta
cgtttagtgagctacgataaagaatcttcttcacgtgcagttaaagatattaaagaaaat
gaagtttatatgggtgaaatcccattaatgactgataacggtactttcgtaatcaatggt
accgagcgtgttatcgtttcacaattacaccgtagtccaggcgtattctttgattctgac
aaaggtaaaacccattcttcaggtaaagtgctttataacgcacgcattattccttaccgt
ggttcttggttagattttgaattcgatccaaaagataacttatttgcgcgtattgaccgt
cgtcgtaaattaccggcaacaatcattcttcgtgcattaggctacaccactgaagaaatc
ttaaacttattctttgataaaattacctttgaaatcgctggcgataaattgttaatgact
ttagtgccagaacgtttacgtggtgaaacagcttcttttgatattgaagcaaatggcaaa
gtttatgttgaacgtggtcgtcgtattaccgcacgccatattaaggcattagaaaaagat
aaaatttcacaagtcgttgtaccttctgaatatattttaggtaaagttgcatcgaaagat
tatgttgatttagagtcaggtgaaattatttgtcctgcaaatggtgagatttctttagag
actcttgcaaaattagcacaagcaggttacaccacgatcgaaactttatttactaatgat
ttagattacggtccatatatttctgaaacgctacgtgtcgatccaacttatgacaaaacc
agtgcgctttatgaaatttatcgcatgatgcgtccgggtgaaccaccaacaccagaatcc
tcagaagcgttattcaataatttattcttctctgcagagcgttatgatttatctgctgtc
ggtcgtatgaaattcaatcgttctttagcgatcgtagaaggtgaaggcgctggcatttta
agcaatgaagatattattgcggtaatgcgtaaattgatcgacatccgtaatggtcgcggc
gaagtggatgatattgaccacttgggtaaccgtcgtatccgtagcgtaggtgagatggcg
gaaaatcaattccgtattggtttagtgcgtgtagaaagagcggtgaaagaacgcttatct
ttaggtgatttagatgcaatcacaccgcaagacttaattaatccaaaaccaatttctgca
gcggtgaaagaattctttggttcttcacaactttcgcaatttatggaccaaaacaaccca
ttatcagaagtcacgcacaaacgtcgtatttctgcattaggtccaggcggtttaactcgt
gagcgcgcaggctttgaagtgcgtgacgtacataatacccactatggtcgtttatgtccg
attgaaacccctgaaggtccaaacatcggtttgatcaactcactttctgcgtttgcacgt
accaatgattatggtttcttagaaacaccatatcgtaaagtagttgatggccaagttact
gaagaaattgaatacctatctgcaattgatgaagcaaactatatcattgcacaggcaaac
tcaaatttagacgaaaataaccgttttactgatgcctttgttactgcacgtggtgaacgt
ggtgaatcaggtttatataaacctgaagatattcactatatggacgtttccacacaacaa
gtggtatctgttgcggccgcattaattccattccttgagcacgacgatgcgaaccgtgcg
ttgatgggtgcgaacatgcaacgtcaagcagttccaacattacgtgctgacaaaccatta
gttggtacaggtatggaaaaaccaatcgcacttgactcaggtgttgcggttgttgcaaaa
cgcggtggtacagttcagtacgtcgatgcttctcgtatcgttattaaagtaaatgaagat
gaaaccattgcaggtgaagctggtattgatatttataacttaatcaaatatacccgttct
aaccaaaatacttgtattaaccaaattccttgtgtgaatttaggtgatccaatcaatcgt
ggtgaagtattggcagatggcccttctactgacttaggtgagcttgcattaggtcaaaat
attcgcgtggcgttcatgccttggaacggctataacttcgaagactcaatgttagtttct
gaacgtgttgttcaacaagaccgtttcactaccatccatattcaagaattatcttgtgtt
gcgcgtgatactaagttaggggcagaagaaattactgcagatattccaaacgtaggtgag
tcagcgttaagcaagcttgatgaatctggtattgtttatgttggtgcagaggttaaaggt
ggtgacatcttagtcggtaaagtaacgcctaaaggtgaaactcaattaaccccagaagaa
aaacttttacgcgcaatctttggtgaaaaagcttctgatgttaaagattcttcattacgt
gtgccaaacggtacatcaggtacggttattgatgttcaagtcttcactcgtgatggcgta
gaaaaagataaacgtgcattagaaatcgaagaaatgcaacttcgtgaagcgaaaaaagat
ttaactgaagagttagagattttagaagctggcttatttgctcgtgttcgtaatcttctt
atttctagtggtgctgatgcagcgcaattagataaattagatcgcactaaatggttagaa
caaaccatttcagatgaagaaaaacaaaatcaattagagcagcttgcagagcaatacgaa
gaacttcgtaaagagtttgaacataaacttgaagtgaaacgtaagaaaatcatcaaaggt
gatgatcttgcaccgggcgtgttgaaaattgtgaaagtttacctcgcggtgaaacgtcaa
atccaaccgggtgataaaatggcgggtcgtcatggtaacaaaggtgttatctcgaaaatt
aacccagttgaagatatgccatacgatgagaatggccaaccagttgagatagtattgaac
ccactgggcgtaccatctcgtatgaacatcggtcagatccttgaaacccacttaggttta
gctgcgaaaggtattggtgatcaaatcaacgcaatgcttaaacaaaaacaagaagtggaa
aaattacgtggttatatccaaaaagcgtatgacttaggtaatggatcacaaaaagtggat
ttaagtaccttcacagatgaagaagtattgcgtttagctgaaaatctacgtaaaggttta
ccggttgcgacaccagtatttgatggtgcagctgaagctgaaattaaagagctattaaaa
cttggtggattaccaacttcaggtcaaatcactttatatgatggccgtacaggtgagaaa
ttcgagcgtccagtaacagtaggttatatgtacatgctcaaattaaaccacttagttgat
gacaaaatgcatgctcgttcaacgggttcttatagccttgttacacaacaaccattgggt
ggtaaagctcaattcggtggccaacgttttggtgagatggaggtatgggcacttgaagca
tacggtgcagcttataccttacaagaaatgttaacggtgaaatcggatgatgtgaatggt
cgtacgaagatgtataaaaacatcgtaagtggtaaccaacacatggacccaggcacaccg
gaatctttcaacgtaattatgaaagaaatccgctcacttggtttaaatatcgagttagac
gaagagtaa
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integrated database retrieval system
