Haemophilus haemolyticus: NCTC10839_00640
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Entry
NCTC10839_00640 CDS
T06216
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hhz
Haemophilus haemolyticus
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhz03021
]
NCTC10839_00640 (rapA)
Transcription machinery [BR:
hhz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCTC10839_00640 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_22
DUF123
Motif
Other DBs
NCBI-ProteinID:
SQH96769
UniProt:
A0A2X4R3C7
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All DBs
Position
1:645709..648480
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AA seq
923 aa
AA seq
DB search
MPFAIGQRWLSESENALGLGIITALDQRTVTIYFPAADETRIYAAAQAPLSRIVFSKGET
LSHQAGWQGEILDVQNMNGLLFYLVKNPQGEDVIVQERDISSIISFSQAKDRLFSAQIDR
SSHFALRYRTLCHQQAQFKSPLRGLRGTRAGLIPHQLHIAAEVGNRVNPRVLLADEVGLG
KTIEAGMILQNQLFAEKVQRVLIIVPETLQHQWLVEMLRRFNLHFSLFDEERCNDFDLDA
VNPFTTESLIICSLNWLETHPNRVEQALDAQFDCLIVDEAHHLVWSESSPSAAYLLVEQL
ARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQECYQPVVNAVESLLAN
KALSAVEKNHISDLLIEQDVEPLFKAIASNNDEEQHRARQELIQALIDRHGTGRMLFRNT
RQGVKGFPQRVYHQITLSEENDKIDWLIDFLKLHRDEKIFVICQTAATAIQLEQILRERE
AIRAAVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNP
DLLEQCIGRLDRIGQKRDVQIYVPCAKDSPQSRLARWYNEGLNAFEQTSPMGMALFVQFA
EELEKVRSNSTALSENEFSELLKQTKTAREKLKIELEKGRDRLLELNSHGGEQAQALADQ
IADEDNSPELVNFALKLFDIIGVEQEDLGANSIVISPTGTMLVPDFPGLKEEGVTVTFDR
ELALAREEMEFLTWDHPMIRQGIDLVASGDIGKAAMALLVNKQLPAGTLLIELIYVVESQ
SPKGLQLNRFLPPTPIRLLLDNKGNNIGEQVAFETLHSKLKPLGKNIANQMVKMARANIE
ALITRGDQLVKPLAEPIIAEAKNQAEQQLSAEINRLQALRAVNKNIRQGEIDILEQQRTQ
SLDELSKANWRLDCLRVIVTNKE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgctattggtcagcgctggttgagtgaaagtgaaaacgctttaggattaggt
atcattaccgcattagatcaacgaactgttacgatttatttccctgcagcagatgaaacg
cgtatatatgctgctgcacaagcgcctttaagccgaattgtatttagtaaaggtgaaaca
ttatcccatcaagccggttggcaaggtgagattttagacgttcaaaatatgaacggtttg
ctattttatttagttaaaaatccacaaggtgaagatgttattgtgcaagaacgtgatatt
tcatcgattatttcttttagccaagcaaaagatcgcctcttttcagcgcaaattgatcgc
agcagtcattttgcattgcgttatcgcacgctttgtcatcagcaagcacaatttaaatcg
ccattgcgtggtttacgcggaacgcgtgcgggtttaattcctcatcagcttcatattgct
gctgaggtcggtaatcgagttaatcctcgcgtgttattggcggatgaggttggtttaggg
aaaactattgaagcaggaatgattttgcagaatcaactttttgctgagaaagtgcaacgt
gttcttattatcgtaccagaaactttgcaacatcaatggctggtggaaatgcttcgtcgt
tttaatttgcatttttcactttttgatgaagaacgttgcaacgattttgatcttgatgcc
gttaatccgtttacaactgaaagcttaattatctgttcgttgaattggttagaaactcat
ccaaaccgagtagagcaggcgcttgatgctcaatttgactgtttaattgtggatgaggcg
catcatctcgtatggtcagaatcttcaccaagtgcagcttatttattagttgaacagctt
gctcgtatcattccctctgtattgttactcacagcaaccccagaacaacttgggcaagaa
agtcattttgctcgtttgcgcttactggatccagaacgtttctttgattatcaaaccttt
gtgaaagagcaggaatgctatcaacctgtggttaatgccgttgaatctttgttggcaaat
aaggcattaagtgcggtagaaaaaaatcatatttctgatttgttgattgaacaagatgtc
gaaccactttttaaagcgattgcatcaaataatgatgaagaacagcatcgtgcccgtcag
gaactgatccaagccttaattgatcgtcatggcacggggcgaatgttattccgcaataca
cgtcaaggcgtgaaaggttttccgcaacgtgtttaccaccaaattacactctctgaagag
aatgataaaattgattggttgattgatttcctcaaactccatcgagatgaaaaaattttt
gtgatttgccagacagcggcaacggcgattcagttagaacaaattttgcgtgaacgtgag
gcgattcgtgcagcggtgttccacgaaaaaatgtcgattattgaacgagatagagccgcg
gcttattttgcggatttagaaaacggtgcacaggttttattgagctcgagtattggatcg
gaagggcgtaacttccaattcgcagcaaatttagtgttatttgatttaccgacaaatcct
gatttattggaacaatgtattggccgattagatcgtattggacaaaaacgtgatgtacaa
atttatgtgccttgtgcgaaagattcgcctcaaagtcgtttggctcgttggtacaatgag
ggattgaatgcttttgaacaaaccagtccaatgggaatggcattgtttgtacagtttgcc
gaagagttggaaaaagtgcggtcaaattctaccgcactttcagagaatgaattttccgaa
ttattaaaacaaactaaaactgctcgggaaaaactcaagattgagttagaaaaaggtcgg
gatcgtttattagagctaaattctcatggcggagagcaagcacaagcgttagcggaccaa
attgctgatgaagataattcgcctgagcttgtgaattttgctttaaaattatttgatatt
attggcgtagagcaagaagatcttggagcaaatagtattgtgattagcccaactgggaca
atgcttgtgcccgattttccgggtttaaaagaagaaggtgtgacggttacctttgatcga
gaacttgcccttgctcgagaagaaatggaattcttgacttgggatcatcctatgattcgt
caaggtattgatcttgttgcttctggtgatattggcaaggccgcaatggcattgcttgtg
aataaacaactgcccgctggaaccttattaattgaattgatttatgtggtggaaagtcaa
tcgccaaaaggattacagctcaatcgttttttgccgccaacgcctattcgtctgctgctt
gataacaaaggaaataacattggtgagcaggttgcctttgaaacattgcatagcaaattg
aaaccacttggtaaaaatattgctaatcaaatggtgaaaatggcacgggccaatattgaa
gccttgattacacgaggcgatcagctcgtaaaacctttagctgaaccgattattgctgaa
gctaaaaatcaagcagaacaacaattaagcgcagaaattaaccgtttgcaggctttgcga
gcagtgaataaaaatattcgccagggcgaaattgatattttggaacaacaacgaacacaa
tcactggacgagctttctaaagcaaattggcgtttggattgcttgcgtgtcattgtgacc
aacaaggaataa
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