Haemophilus haemolyticus: NCTC10839_00747
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Entry
NCTC10839_00747 CDS
T06216
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
hhz
Haemophilus haemolyticus
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhz03019
]
NCTC10839_00747
Enzymes [BR:
hhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC10839_00747
Messenger RNA biogenesis [BR:
hhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC10839_00747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
T2SSE
nSTAND3
AAA_30
ResIII
NACHT
AAA_25
TsaE
Fis1_TPR_N
Motif
Other DBs
NCBI-ProteinID:
SQH96864
UniProt:
A0A2X4UFY6
LinkDB
All DBs
Position
1:complement(741879..745790)
Genome browser
AA seq
1303 aa
AA seq
DB search
MKNRSVKHALTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSLEAQQAVADEIQQQIE
QARLRIEQRKSAVQNPIVFPESLPVSQRKAEIQKLLSEHQVIVVAGETGSGKTTQLPKMC
LELGFGNLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDDTQIKLMT
DGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRDLKVIITSATIDV
ERFSKHFNNAPIIEVSGRTYSVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFM
NGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTV
PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF
NSRPEFTDPEILRTNLASVILQMTALGLDNIEAFPFVDAPDKRHIQDGIKLLEELGAFEL
IRTKAGEKRQLTAAGRQLSQLPVDPRLAKMLLSAVSQGALHEVMIIVAALSIQDPRERPQ
EKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKELSKNQFRHQCQKDFLNYLRIREWQ
DIYHQIRLTVREMGLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYIGARNAHFAIF
PNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSEPRWSKSRGA
VIADEKVTLYGVPIVAARPVNYGAIDPTVSREIFIQSALVEGDWNTKHKFFKENQRLVRE
VEELEHKSRRRDILVDDRTLFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFERSFL
INDDAEQVSKLDFPNFWHQGNLKLKLTYQFEPGTEADGVTVHIPLPLLNQVEMTGFDWQI
PGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGVTV
ETEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKFNLKDRVQESISAVADDGIEQS
GLHIWSFADLPQCYEQKQRGFSVKAFPAIVDEKDAVGIKLFETEFEQAVAMQQGLRRLLL
LNVPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEVGFE
KLRDFVREKLNEVTVDIAQKVEQILSLNHALNQRLKGKMDFTMAFALSDIKSQLSGLVYQ
GFVQKSGYDRLPDLLRYLQAIDKRMDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSK
PISDEVAEIRYMIEELRVSLFAQLLGTKYQISDKRIANIISQY
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagatcggtaaaacacgcattaacacctttacaacaatctcttttttctcaa
ttaaatgacatcatgctggtggatcaacgtcgcttatccgcccgcattcatggcataggt
aagattaaaagcctagaagcacaacaagccgttgcagatgaaatccaacagcaaattgaa
caagcaagattacgtatagaacaacggaaaagtgcggtacaaaatcccatcgtttttcca
gaaagcctacctgttagccaacgcaaagcagaaattcaaaaactgctttctgaacatcag
gtcattgtggtggcgggggaaactggttcaggtaaaaccacccaattgccgaaaatgtgt
ttggaattaggtttcggcaatttgggcatgattggtcatactcaaccacgccgtattgct
gctcgttcagtggcggcgcgtattgcggaagaactggaaacagaacttggcggtttagtt
ggttataaggttcgttttaacgatcaaatcagtgatgatacgcaaatcaagttgatgacc
gatgggatcctgctagcagaaattcaaaacgatcgtttcctcaaccaatattcttgtttg
attatcgatgaagcgcacgaacgtagtctaaataacgattttattctcggttacctgaaa
cagcttttaccacgtcgtcgtgatttaaaggtcatcatcacttctgcaaccattgatgtg
gaacgcttttctaaacactttaacaatgcgccgattattgaagtctcaggcagaacctat
tctgttgaagttcgttatcgtcccgtagttgaagaggacgatcaagatcaactacaaggc
attcttaacgcggtggatgaactgcaagcggaaggtcgaggcgatattttgatctttatg
aacggcgagcgagaaattcgtgataccgccgaagctttacaaaaacaaaatctaaaacat
acggaaatcctaccgctctttgcacgtctttctgcgcaagaacagaataaaattttccat
ccgagcggattaaatcgcatcgtgttggcgaccaacgtcgcagaaacctcattgaccgtg
ccgggcattaaatatgtgattgatcctggtactgcacgcatttcccgttatagctatcgc
accaaagtacaacgtttgccgattgaacctatctcacaggcatctgctaatcagcgtaaa
ggtcgttgtggtcgtgtaagtgaagggatttgtattcgtttatattcggaagaggatttt
aattctcgtccggagtttaccgatcctgaaattctgcgcaccaatttagcctccgttatt
ttgcaaatgacggcattgggcttggataatattgaagccttcccatttgtggatgcgcca
gataaacgccatattcaagatgggataaaactgttggaagaattgggcgcgtttgaactg
attcgcaccaaagcgggcgagaaacgtcaattaacggctgcaggtcgtcaattatctcaa
ctccctgtggatccacgtttagcgaaaatgttgctgagcgctgtctcacaaggtgcgttg
catgaagtgatgattattgttgccgcgttatctattcaagatccgcgcgagcgtccacaa
gaaaaacaacaagcttccgatgaaaaacatcgacgttttgctgataaaaaatcagatttc
ttggcattcttaaatctttggcgttatctacaagaacaacaaaaagaattgagtaaaaac
caattccgacaccaatgccaaaaagatttcttaaattatttacgcattcgtgaatggcag
gatatttatcatcaaattcgtttaaccgtgcgtgaaatgggcttgccgattaattccgaa
aaagccgaatatcagcaaattcataccgcacttttaagcggcttgctttctcatatcggc
ttaaaagaagcggaaaaacaacaatatattggtgcacgtaatgcccattttgcgattttc
cccaattccgtgcttttcaaaaaacaaccaaaatgggtgatggcggcagagttagtggaa
acctccaaactttgggggcgcatggtggcagaaatcgagccagaatggattgagccactt
gccgagcatttaattaaaaaatcctattccgagccgcgttggtctaaatctcgtggggcg
gtgattgcagatgagaaagtcacgctttatggtgtgccgattgtggctgcacgaccagtg
aattacggagctattgatccaacggtaagccgcgagatctttattcaatctgccttagtg
gaaggggattggaataccaaacataaattcttcaaagaaaatcaacgactcgttcgggaa
gtggaagagttggaacacaaaagtcgccgccgcgatattttggtggacgatcgcacgctt
tttgaattttacgatcagcgtattggcacggaagtagtttcccaaaaacattttgatacg
tggtggaaaaaggcgcagcaaaaagatcctgaattgcttaattttgaacgttcattcttg
attaatgatgatgcggaacaagtgagcaagctggattttccgaatttctggcatcaagga
aatttgaaactcaaattaacttatcaatttgaaccaggcaccgaggcggatggcgtgacc
gtgcatattccgttgccattgctcaatcaagtggaaatgaccggctttgattggcaaatt
ccaggcttgcgtgaagaattagtgattgcgctgattaaatctctgccgaaatcttatcgt
cgtaacttcgtgcctgcacctaattatgcccaagcttttttaagtcgagccgtgccgttg
gaaaaaccgttattagatacgctgatttatgaattgcgtcgtatgacgggcgttaccgta
gagacggagcattggaattgggaacagatcccaagccatttgaaaatgacgttccgtgtg
gtggatgaaaatggcaagaaaattgctgaatccatgaatttggatgagctgaaattcaac
ttaaaagatcgtgtgcaggaaagtatttctgctgtggcagatgatggcattgagcaaagc
ggattgcatatttggagctttgcagatttaccacaatgttacgaacaaaaacaacgtggt
tttagcgtcaaagcgttcccggctattgtagatgaaaaagatgcggttggtatcaaactg
tttgaaacagagtttgagcaagcggtggcgatgcaacaaggtttgcgtcgattgttgtta
ctcaatgtaccgtcaccgattaaatatttacatgaaaaattaccgaataaagctaaattg
ggtctgtattttactccgttcggtcgagtgttggatttgattgatgactgtatcgcttgt
gccgtggataaactgattgccgattttggcggttttgtttgggatgaagtaggctttgaa
aaattacgtgatttcgttcgagaaaaactgaacgaagtgaccgtagatattgcacagaaa
gtggagcaaattctctcccttaaccatgccttaaaccaacgtttaaaaggcaaaatggat
ttcaccatggcattcgcattgtccgacatcaaatcacaactttcaggcttggtgtatcaa
ggttttgtacaaaagagcggttatgatcgcctaccggatttactccgctatctgcaagcc
atcgacaaacgcatggataaactggctcaagatgtgaaccgcgatcgtgccgcgatgcta
cgtgtagaacaggtgcaacaggcttaccaacaattgctcgctaaactaccaaaatctaaa
ccgatttctgatgaggttgcggaaattcgttatatgattgaagaattacgagtcagttta
tttgctcaactgctgggaacaaaatatcaaatatcggataaaagaatagcaaatattatt
agtcaatattaa
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