Haemophilus haemolyticus: NCTC10839_00901
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Entry
NCTC10839_00901 CDS
T06216
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hhz
Haemophilus haemolyticus
Pathway
hhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10839_00901 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhz03019
]
NCTC10839_00901 (rhlB)
Enzymes [BR:
hhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10839_00901 (rhlB)
Messenger RNA biogenesis [BR:
hhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10839_00901 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
SQH97016
UniProt:
A0A2X4R4V9
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All DBs
Position
1:898014..899261
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AA seq
415 aa
AA seq
DB search
MQQDYLSQQRFSDLSLHPIVRDALAKKGFDFCTSIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTATFHHLLTRQDPNLEYPHPRALILAPTRELAVQISNDAEFLAKESGLKTALAYGG
DGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPAPQARLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVPPQGHTRHRSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacaacgattctccgatctttctctacacccaattgta
cgagatgctttggcaaaaaaaggctttgatttttgtacctcaattcaggctttatccttg
cctatcagtttaaatggacgagatgtcgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacggctacttttcatcatcttttaactcgccaagatcctaatcttgaa
tatcctcacccaagagctctgattttagcacctactcgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagaaagtggattaaagaccgcacttgcctatggtggc
gatggttatgataaacagctacaagcgattgagcgtggcgtcgatattttgattggtacg
acggggagagtcattgattatgtgaaacaaggcgtaattggtttagatgaaatccaagtt
gtcgtgctagatgaagcggatcgaatgttcgatcttgggtttatccgtgatattcgttat
ttattgcgtaaatgccccgctccgcaagctcgtttaacgatgttattttcagcgacactt
tcttataaagtgcgtgaattagcatttgaagatatgaatgaccctgaatatattgaaatt
gaaccggaacaaaaaacagggcaccgaatcaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgaatggcctgagcgctgtattgtg
tttgcgaatacaaaacatcgttgtgaagaaatttggggttatttggcggctgatggacat
cgtgtcggtttactgactggcgatgtagcacagaaaaaacgtttatcgttattgaaacaa
tttaccgacggtgatttagatattttagtagcaacagatgtggctgctcgtgggttacat
atttctgatgtgacgcatgttttcaattatgatttacccgatgatcgagaggattatgtt
caccgaatcggtcgtactggacgagctggggaaagtggtgtttctattagtttcgcttgc
gaagaatatgcgatgaatttacccgctattgaggaatatattggccattctatcccagtg
agccaatatgaaacagaagccttacttgaactgccgaaaccatatcgtttaaaacgtgcg
gtaccaccgcaagggcatacaagacatcgttcttatcacacaaaatag
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