Haemophilus haemolyticus: NCTC10839_01138
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Entry
NCTC10839_01138 CDS
T06216
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhz
Haemophilus haemolyticus
Pathway
hhz03420
Nucleotide excision repair
hhz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10839_01138 (uvrD)
03430 Mismatch repair
NCTC10839_01138 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhz03400
]
NCTC10839_01138 (uvrD)
Enzymes [BR:
hhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10839_01138 (uvrD)
DNA repair and recombination proteins [BR:
hhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10839_01138 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC10839_01138 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
DUF4391
Motif
Other DBs
NCBI-ProteinID:
SQH97239
UniProt:
A0A2X4R4V5
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All DBs
Position
1:complement(1128600..1130780)
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AA seq
726 aa
AA seq
DB search
MDISELLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMAV
TFTNKAAAEMRHRIQATLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILDS
EDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYKI
YQDTCDRAGLVDFAELLIRAYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKIL
AGETGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANELI
ANNSDRLGKNLWTEGEKGDPVGIYAAFNELDEAKFVTSQIQGWVEHGGKLDDCAVLYRSN
SQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTRG
IGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMPL
FAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVTATREFIKPDDAEDMTELTAFLTH
ASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEERR
LAYVGITRAKKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNLA
KVGSLSNTSEVENEWKMCQKVKHEKFGFGTIINVEGSDNNTRLQIAFQAQGIKWLIAHLA
KLEKVR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctgaattacttgacggacttaacgataaacaacgtgaagccgtagctgct
cctcttggtaatcacttagtgctggctggtgcaggctctggcaaaacgcgcgtattgacg
caccgtatcgcctggttaattgcggtagaaaatatttctgaaggcagcattatggcggta
acgtttaccaataaagcagcagcagaaatgcgtcatcgtattcaagctacccttgccaaa
cacgcacaacatcaattatttggtatgtggattggtaccttccatagcattgcccatcgt
ttattgcgagcccatcatttagatgtaggattgccacaagatttccaaattctggattca
gaagatcaacttcgtttaattaaacggttattaaaattacataattttgatgaaaaagcc
tttccacccaaacaggcttgctggtacatcaataacaaaaaagatgaaggcttgcgccca
aacgacattgaagattttaatgatcgccaagaacgtgaatggattaaaatttataagatc
tatcaagacacttgcgatcgcgcaggattagtcgattttgctgaattattaattcgggct
tatgaattatttgagaaaaaaccattaattttgcaacgttatcaacaacgttttcagcat
attttggtggatgagtttcaagacaccaataaaattcaatataaatggatcaaaattctc
gccggagaaacaggcaaagtcatgatcgtgggcgatgatgatcaatctatatacggttgg
cgtggtgcacaaatcgaaaatattcaaaaattcttgaaagatttcaaagcagaaacaatt
cgccttgaacaaaactatcgttctacagccaatatcctaaacagcgcaaatgaattaatt
gcaaacaatagtgatcgtcttggtaaaaatttatggacagagggtgagaaaggcgatcct
gtgggcatctatgccgcttttaatgaattggacgaagcaaaattcgttacttcacaaatt
cagggttgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagtaat
agccaatcacgcgttattgaagaagccttaattcgttgtcaaattccatatcgtatttat
ggcggtatgcgtttcttcgaacgtcaagaaattaaagatgctttggcctatcttcgtttg
attaataatcgtcaagatgatgcggcttttgagcgtgtaattaatacgccaacccgtggc
attggcgaccgtactttagatatattgcgcaacttaacacgcgaacgccaaattacctta
tggcaagcagtacaagtcgcaacacaagaaaatatgttggctgggcgagcctcaacagca
ttattgcgtttccaggaattaattaattcactacaacttgatactgcagaaatgccgctt
ttcgcacaaactgattttgtgattaaacattcgggtttatatgaaatgtataaacaagaa
aaaggtgaaaaaggcgaagtgcgtattgaaaacttggaagaattagttaccgcaacccgt
gaatttatcaaacctgatgatgcagaagatatgactgagctcaccgcctttttaactcat
gcctctttagaagctggtgaagaacaagcctctccacatcaatcctgtgtagaaatgatg
acattacactcagctaaaggcttggaatttcctcgtgtatttatggttggcgtagaagaa
ggtttattcccaagtttccgttcttttgaagaacctgggcgtttagaagaagaacgtcgt
ttagcttatgtcggcattactcgcgcgaagaaaaaactgaccatctcttatgcggaaagt
cgtcgattatatgccaaagaagaacgccatttgccatcacgctttattgcggaattacca
cgagaatgtatccaagaaattcgtttacgaggaactgtcacgcgcgcaatgaatctagca
aaagtcggttcattgtcgaataccagtgaggtcgaaaatgaatggaaaatgtgtcaaaaa
gtcaaacatgaaaaattcggttttggcaccatcattaatgttgagggatcagataacaat
actcgcctccaaattgccttccaagcgcaagggattaaatggctcattgcacatttggca
aaactagaaaaagtgcggtag
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