Haemophilus haemolyticus: NCTC10839_01686
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Entry
NCTC10839_01686 CDS
T06216
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hhz
Haemophilus haemolyticus
Pathway
hhz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10839_01686 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhz03400
]
NCTC10839_01686 (uvrB)
DNA repair and recombination proteins [BR:
hhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10839_01686 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10839_01686 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
UvrD-helicase
AAA_22
CC2-LZ
DUF87
Motif
Other DBs
NCBI-ProteinID:
SQH97762
UniProt:
A0A2X4RKD1
LinkDB
All DBs
Position
1:1718958..1720997
Genome browser
AA seq
679 aa
AA seq
DB search
MSEKINTKPFILHSDFRPSGDQPQAIKKLAENLTDGLAHQTLLGVTGSGKTFTIANVIAQ
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDIFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLQMMLHLQQGAIIDQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGCSF
GAVPRFTIYPKTHYVTPRERILDAIENIKKELVSRREYFIKEHKLLEEQRISQRTQFDIE
MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYELEKSGSEIIDQVVRP
TGLLDPLIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLNGKAILYADSITKSMEKAITETNRRREKQTKYNEEHGIVPQALNKKVGE
LLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKEYQQQIKKLEQQMYKFAQDLEFEK
AAAIRDQLHQLREQFVFDN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaatcaacacaaaaccgttcattctgcattccgactttcgtccctctggc
gatcagccacaagctatcaaaaaattggctgaaaatttaacagatggattagctcaccaa
actttactcggggtaacaggctcggggaagacgtttactatcgccaatgtaattgctcaa
ttaaatcgccccgccatgttacttgcaccgaataaaacccttgcagcccagctttatgca
gaaatgaaagccttttttccagaaaatgcggtggaatattttgtgtcttactatgattac
tatcagccagaagcctatgtgcctagcagtgatatctttattgaaaaagatgcgtctatt
aatgatcaaatcgaacaaatgcgtctttctgcgacgaaatcttttttagaacgtcgagac
accatcgtggtggcttccgtttctgcaatttatggtttgggcgatcctgatagctattta
caaatgatgttgcatttacaacaaggtgccattatcgatcagcgccaaattttagcgaag
ttagcggaattacaatatacccgcaatgatcaagcatttcagcgtggaactttccgtgtt
cgaggagaaattattgatattttccccgcggaatccgatgatcgtgcagtgcgtattgaa
ttattcgatgatgaaattgaacgattaagtttatttgatccgctcactggctgtagtttt
ggtgcagtaccacgttttacaatctatcctaaaactcactatgtgacgccaagagaacgt
attttagatgcaatagaaaacatcaaaaaagaactcgtatcacgccgtgaatacttcatt
aaagaacataaacttttagaagaacaacgcatcagccaacgtacccaattcgatattgaa
atgatgaatgaattgggctattgctcgggcattgaaaactactctcgctatttatcggga
agaaatgagggcgaaccaccaccaacattatttgattatatgccctctgatgccatttta
attattgatgaatctcatgtgacggtacctcaaattggtggaatgtatcgcggcgaccgt
tctcgcaaagaaaccttggttgaatatggtttccgtttaccgtccgcattggataatcgt
ccgttacgctttgaggaatttgaacgcttagccccacaaaccatttatgtttccgcaaca
ccagggccttatgaattagaaaaatcaggcagtgaaatcatcgatcaagtggttcgtccg
actggtttgcttgatccgctcattgaaattcgtccagtgtctattcaagtagatgatttg
ctttccgaagctcgccaaagagcggataaaaatgagcgtgttttagtgacaacactcact
aaaaaaatggcagaagatttaacggattatttagatgaacacgggatccgagtacgttat
ttacattctgatattgataccgtagaacgtgtggaaattatccgtgatttgcgtttaggc
gaatttgatgtattggttgggattaacttattgcgtgaaggtttagatattccagaagtg
tctcttgtggcgattttagatgctgacaaagaaggatttttacgttccgaacgttcttta
atccaaaccatcggccgtgctgcacgaaacttaaatggtaaagcgattttgtatgcggat
agcatcacaaaatcgatggaaaaagccattactgaaaccaatcgtcgtcgcgaaaaacaa
acaaaatacaatgaagagcatggcattgtgccacaagcattaaataagaaagtcggtgaa
ttgctagatattggacaaggtgcaaatcaaaaagcgaaagccaataaacaacgtggaaaa
atggcggcagaaccaaccgcactttataatgcaccaaaaaatgccaaagaatatcaacaa
caaatcaaaaaactggaacaacaaatgtataaatttgcgcaagatttggaattcgaaaaa
gccgctgcaattcgcgatcaattacatcaattgcgtgaacagtttgtttttgataactaa
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