Haemophilus influenzae CGSHiCZ412602: H733_0125
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Entry
H733_0125 CDS
T03436
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hia
Haemophilus influenzae CGSHiCZ412602
Pathway
hia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H733_0125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hia03019
]
H733_0125
03009 Ribosome biogenesis [BR:
hia03009
]
H733_0125
Enzymes [BR:
hia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H733_0125
Messenger RNA biogenesis [BR:
hia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H733_0125
Ribosome biogenesis [BR:
hia03009
]
Prokaryotic type
rRNA helicases
H733_0125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIB44948
LinkDB
All DBs
Position
142561..144402
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AA seq
613 aa
AA seq
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MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLSGNDVLGMAQTGSGKTAAFA
LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRA
LKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH
QTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLE
VEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVESRERRLLRNIE
HLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIA
AAMLMLLQGKQKLILPPDPPMEKRRRERNERGDRRENPRSAERRGERKGYGNPQPMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRV
LNKQMQMSFLGAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaattacttttaatgacttaggcttacctgagttcatcttaaaagctgtt
tctgacttaggttttgaaacaccttctccaattcaacaatcttgtattccgcatttgctc
agtggcaatgatgtgctaggtatggcacaaacgggtagtggtaaaactgctgcctttgca
ctgcctttattagcgcaaatcgatccaagtgaaaaacatccacaaatgttagtgatggca
cctacacgcgaacttgctattcaagttgccgatgcgtgcgaactatttgttaaatatgca
cagggcactcgcattgttaccttatatggtggccaacgttatgacatccaacttcgtgca
ttaaaacaaggcgcacaagtggttgtgggtacaccaggtcgtattcttgaccatattcgt
cgcggaacattaaatctttctgaacttcgttttatcgtattagatgaagctgatgaaatg
ctacgtatgggtttcattgatgatgtagaaaccgtcatggcagaattaccagaaaatcat
caaactgcgttattctctgcaacaatgcctgaaccgatccgtcgtattactaaacgtttt
atgaatgatccacaagaagtgaagatcaaagtgaataacgaaaatgccccagatatcgac
caaagttgttggtatgtacacggcgtgcgtaaaaacgaagctcttcttcgtttcttagaa
gtggaagattttgatgcagcgattatctttgctcgtactaaaactggcacgttagacatt
acagaactacttgaaaaaaatggtttccgttctgccgcacttaatggcgatatgacacaa
caattacgcgaacaaaccctcgatcgcttacgtaacggcagtttagatattgttgtggca
accgatgtggctgcacgcggtattgatattgaacgtatcagccttgtggtgaactacgac
attccgcttgatgcagaatcttatgtacaccgaattgggcgtactggtcgtgcagggcgt
tctggtcgtgctttattattcgttgagtctcgcgagcgtcgtttacttcgtaatattgaa
cacctaatgaaaaaaggtatcaatgaagtagaattgccaaatcatcttgtgttacaagaa
tgccgccgcaaaaaatttgtcgcaaaaattacgaaacaactcgagcatcacgatttagaa
caatatcgtagtttattagaagacttattcacagccgatcaggatcaagaagatattgct
gcagcaatgttgatgctgcttcaaggtaaacaaaaattaattcttccacctgatccgcca
atggagaaacgtcgtcgtgaacgtaatgaacgaggcgatcgccgtgaaaatccacgttca
gctgaacgtcgtggcgaacgtaaaggctatggaaatccacaaccaatggatttatatcgt
atcgaagtcggtcgtgcagatggtgtagaagttcgccatatcgttggtgcgattgctaac
gaaggcgatattaacagccgttatattggtcatattaaactttatgatgactacactacc
gttgaattgccacaaggtatgccgaaagaattattgcaacaattcggaaaaacacgagta
ttgaataaacaaatgcaaatgtctttcttaggtgcagtaaaatccgataattcccgtggc
agcgatgattttaacggtaaacgtaaaggtcgtggtggcgatttccgtggagagcgcgga
cgtgaacgcggcaatgataatcgtggaaatcgtaaatttaatgaaaaaagtaaccgcact
tttagcgataaaccacgccgtgatcgtagatcatcattctaa
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