Haemophilus influenzae CGSHiCZ412602: H733_1382
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Entry
H733_1382 CDS
T03436
Name
(GenBank) HrpA-like helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
hia
Haemophilus influenzae CGSHiCZ412602
Brite
KEGG Orthology (KO) [BR:
hia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hia03019
]
H733_1382
Enzymes [BR:
hia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H733_1382
Messenger RNA biogenesis [BR:
hia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H733_1382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
ResIII
HA2_N
NACHT
TsaE
AAA_30
DUF3301
Fis1_TPR_N
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AIB46199
LinkDB
All DBs
Position
1448961..1452872
Genome browser
AA seq
1303 aa
AA seq
DB search
MKNSSVKHTLTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIE
QARLRVEQRKSAVQNPIVFPESLPVSQLKVEIQKLLSEHQVIVVAGETGSGKTTQLPKMC
LELGFGNLGMIGHTQPRRIAARSVAVRIAEELETELGDLVGYKVRFNDQISDDTQIKLMT
DGILLAEIQNNRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRDLKLIITSATIDV
ERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEENDQDQLQGILNAVDELQAEGRGDILIFM
NGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTV
PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF
NSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFET
VQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQ
EKQQASDEKHRRFADKKSDFLAFLNLWYYLQEQQKELSKNQFRRQCQKDFLNYLRIREWQ
DIYHQIRLTVREMGLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIF
PNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSEPRWSKSRGA
VIADEKVTLYGVPIVAERPVNYGAIDPTVSREIFIQSALVEGGWNTKHKFFKENQRLVQE
VEELEHKSRRRDILVDDRTLFEFYDQRIGTEVVSQKHFDTWWKKEQQKDPELLNFERSFL
INDNAEQVSKLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQI
PGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAMPLEKPLLDTLIYELRRMTGVTV
EAEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKFNLKDRVQESISAVADDGIEQS
GLHIWSFADLPQCYEQKQRSFSVKAFPAIVDEKDAVGIKLFETEFEQSVAMQQGLRRLLL
LNVPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGFE
KLRDFVRENLNEVTVDIAQKVEQILTLTYQLNQRLKGKMDFTMAFALSDIKSQLAGLVYQ
GFVQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSK
PISDEIAEIRYMIEELRVSLFAQQLGTKYQISDKRIANIISQY
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagctcggtaaaacacacattaactcccttacaacaatctcttttttctcaa
ttaaatgacattatgctggtggatcaacgtcgcttatccgcccgcattcatggtattgga
aaaattaaaagccaagaggctcaacaagctgttgccgctgaaatccaacagcaaattgaa
caagctagattacgtgtagaacaacgaaaaagtgcggtacaaaatccgattgtttttcca
gagagtttgcccgttagccaactcaaagtcgaaattcaaaaactgctttctgaacatcag
gtcatcgtggtggcaggggaaactggttcaggtaaaaccacccaattgccgaaaatgtgt
ttggaattaggtttcggcaatttaggcatgattggtcatacccagccacgccgtattgct
gctcgttcggtggcggtgcgtattgcggaagaactagaaacggagctaggcgatttagtc
ggttataaggttcgttttaacgatcagatcagtgatgatacacaaatcaaattgatgact
gacgggattctgttagcggaaattcaaaacaatcgttttctcaatcaatattcttgtttg
attatcgatgaagcccacgaacgtagcctaaataacgattttattctcggttatctgaaa
cagttgttgccacgtcgtcgtgatttaaaacttattatcacttctgcaaccattgatgtg
gaacgcttttctaaacactttaacaatgcgccgattattgaagtctcaggcagaacctat
cctgttgaagtgcgttatcgtcccgtagtggaagaaaacgatcaagatcagctacaaggt
attctgaatgcggtggatgaattgcaagcagaaggtcgaggcgatatcttgatctttatg
aatggagagcgtgaaattcgtgatactgccgaagccttgcaaaagcaaaatctaaaacac
acggaaattctaccgctctttgctcgattgtctgcacaagaacaaaataaaattttccat
ccaagcggtttaaatcgcattgtattggcgaccaacgtcgcagaaacctcattgaccgtg
ccaggcattaaatatgtgattgacccaggtacagcacgcatttcccgttatagctatcgc
accaaagtacaacgtttaccgattgaacctatttcacaggcatccgctaatcagcgtaaa
ggtcgttgtggtcgcgtaagtgaagggatttgtattcgtttatattcggaagaggatttt
aattctcgtccagagtttaccgatcctgaaattctacgcaccaatttagcctccgttatt
ttgcaaatgacggcattgggtttggatgatattgaagcgttcccatttgttgatgcgcca
gataaacgccatattcaagatgggataaaactgttggaagaattgggcgcgtttgaaact
gttcaaactaaatcgggtgaaaaacgcctattaactagagttggtcgccaactcgctcaa
cttccagtcgatccgcgccttgccaaaatgatcctaagtgcggtcaattttggctgcgtt
tatgaaatgatgatcatcgtctctgcgttatccattcaagatccgcgcgagcgtccacaa
gaaaaacagcaagcttctgatgaaaaacatcgtcgttttgccgataaaaaatcagatttc
ttggctttcctcaatctttggtattatctacaagaacaacaaaaagaattgagtaaaaac
caattccgtcgtcagtgccaaaaggatttcttaaattatttacgcattcgtgaatggcag
gatatttatcatcaaattcgtttaaccgtgcgtgaaatgggcttaccgattaattctgaa
aaagcagaatatcagcaaattcataccgcacttttaagcggtttgctttctcatatcggt
ttaaaagaagcggagaaacaacaatatcttggcgcacgtaatgcccattttgcgattttc
cccaattctgtgcttttcaaaaaacaaccgaaatgggtgatggcggcagagttagtggaa
acctccaaactttgggggcgtatggtggcagaaatcgagccagaatggattgagccactt
gccgagcatctcattaaaaaatcctattcagaaccgcgttggtcgaaatcccgtggcgcc
gtgattgcagatgaaaaagtcacactttacggtgtgccgattgtggctgagagaccagtg
aattacggtgctattgatccaacggtaagccgtgagatttttattcaatctgccttggtg
gaagggggttggaataccaagcataaattcttcaaagaaaatcaaaggctcgttcaagaa
gtagaagaattggaacacaaaagccgccgccgcgatattttggtggatgatcgcacattg
tttgaattttacgatcagcgtattggcacggaagtggtttcccagaagcattttgatacg
tggtggaaaaaggaacagcaaaaagatccagaattgcttaattttgaacgttcatttttg
atcaatgataatgcggaacaagtgagcaagctggatttcccgaatttctggcatcaaggt
aatttaaaactcaaattgacttatcaatttgaaccaggtaccgatgcggacggcgtgaca
gtacatattccattgccattgctcaaccaagtggaaatgacaggctttgactggcaaatt
ccaggcttgcgtgaagagttggtgattgcgctgattaaatcgctgccgaaatcttatcgc
cgtaacttcgtacctgcacctaattatgctcaagcttttttaagtcgagccatgccgttg
gaaaagccattattagatacgctgatttatgaattgcgtcgtatgacgggcgttactgta
gaagcggaacattggaattgggagcaaattccaagccatttgaaaatgactttccgtgtg
gtggatgaaaacggtaagaaaattgcggaatccatgaatttggacgagctgaaattcaac
ttaaaagatcgtgtgcaggaaagtatttctgctgtggcagatgatggcattgagcaaagt
gggctgcatatttggagttttgcagatttaccacaatgttacgaacaaaaacaacgtagt
ttcagcgtcaaagcgttccccgccattgtagatgaaaaagatgccgtaggtatcaaactg
tttgaaacagagtttgagcaatcggtggcgatgcaacaaggtttacgtcgtttgttattg
ctcaatgtgccgtcaccgattaaatatttgcatgaaaaattgccgaataaggctaaattg
ggtctgtattttactccgttcggtcgcgtattggatttgatcgatgactgtattgcttgt
gcggtggataagctaattgccgattttggcggttttgtgtgggatgaagcaggttttgaa
aaattgcgtgatttcgttcgagaaaaccttaacgaagtgaccgtggatattgcgcagaaa
gtggagcagattcttactctcacttaccaacttaaccaacgccttaaaggcaaaatggat
ttcacgatggcatttgcattatccgacatcaaatcgcaacttgcaggtttggtgtatcaa
ggttttgtgcaaaagagcggttatgatcgcctaccagatttacaacgttatctgcaagcc
gttgataaacgcattgataaactggctcaagatgtgaaccgcgatcgtgccgcgatgcta
cgcgtggaacaagtgcaacaggcttaccaacaattactggctaaactgccaaaatctaaa
ccgatttctgatgaaattgcggaaattcgctatatgattgaggaattacgagtgagttta
tttgcccagcagttggggacaaaatatcaaatatcggataaaagaatagcaaatattatt
agtcaatactaa
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