Haemophilus influenzae C486: NTHIC486_00032
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Entry
NTHIC486_00032 CDS
T03721
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hic
Haemophilus influenzae C486
Pathway
hic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NTHIC486_00032 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hic03400
]
NTHIC486_00032 (recC)
Enzymes [BR:
hic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NTHIC486_00032 (recC)
DNA repair and recombination proteins [BR:
hic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NTHIC486_00032 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJO88806
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All DBs
Position
complement(27997..31362)
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AA seq
1121 aa
AA seq
DB search
MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMVQWLQIELAKETGISANL
KFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIPIFLEKENFSPLRNYLSSSPH
SEQYKLYQLSSKIADLFDQYLVYRPEWIFAWEKGEDEQITDQIQKQQPNLNNTLFAQIQG
NTKWQGELWRALVVDVKSDVNEATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPT
AYLNILQAISSEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQDENQPLFSEDQ
LSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYTLVRDEEHIPTYPVNAYQEIKSN
SLLGQLQSQILHLENKPLNIAKNDRTLTLHSCHSAMREVEVLHDYLLDLFNQDPNLTPKD
VVVMVADINQYTPYIQAVFGQKNGGAPQIPFSLSDNKLSENDVLVSSYLTLLGLKESNFS
AEDVLALLDIPAMRERFNISLADLPLVREWVADSGIRVGLQKNQDGINFNSWQAGLERMI
LGYAMREEQGIWQDSLGLNSSYGLKGELAGNLSHFFTALSALHETLQQAHSIEKWQEILT
ALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTLHFTEKLQAEVIADVITMKLEDAPNSL
KFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPNSFDLMQYHYQKGDRVRRDDD
RYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQLLDYINQGQKENVLTVIEHPMT
AFSPDNFKYNEKFTRSFATKWLPIAQFDTAASNSEFAVTMTENPEKIEEVELDSLVSFVE
NPVKFFFEKQLGVYFRDKDERIADSENFTLSGLDNYSLNNDLIYLDEQNFADYFRQAEVK
GVLPRAEFGKVYAENIRDNVLEFKEKIADLGEPKQASIDFNIAVDWQNENQKIRLFGYMD
ALFGDDSQVIHWHFAKYKDRYCIRPWIYYLIQCVTQENAIPAKLITQDQVIELPPIEREV
ALAQLQIYVKDYLQSQIEIQLVPTVRNISDFIVGDENSVSEKLRELTESNGFGPKADPYW
SRVLAQTSRFKQPENLAKLLKQTKAWFGLLFAQKKTRKAQS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattgtttattattccaatcagcttgaaaaacaaaaagaaattctttcttcatta
ttcaaatctttaccgcctgaagatccttttcaacaagatattatcttggtacaaagccct
aatatggtgcaatggctacaaattgaacttgccaaagaaacaggtatttcagcaaaccta
aaatttcctatgccagccagttttatttggcaactttatgcacaaaatttacctgcaacg
gcattagagaacccttttgataaagattcaatgatgtggcgtttaatgcgcttaatccca
atttttcttgagaaagaaaatttttcgcctctacgcaattatttatcatcttcgccacat
tctgaacaatataaactttatcaacttagcagtaaaatagccgacttatttgaccaatat
ttagtttatcgacctgaatggatttttgcttgggaaaaaggcgaagatgaacaaatcact
gatcaaatacaaaaacagcaacctaacctaaacaatactttgtttgcgcaaattcaaggc
aacacaaaatggcaaggtgagttatggcgtgcattggtcgtcgatgttaaatcagatgtt
aatgaagccacccatcgagcggctttgcataatcaattcttagccttgcttgccgataaa
aaagcaccgaaaaaattaccttcacgcatatttatttttggtattcctgcgcttccaact
gcttatcttaatattttgcaagcgatatcctctgaagtggatattcatttattttttaat
aatccttgccaagaatattggggggatattagtgatctacgccttgattatttgcgttct
cgtcagcgttatcaattcaataaacaagatgaaaatcaaccgctcttttccgaggatcaa
ctttctcaactagaaaacgctcagtttgacgtcacttatcaaaaagaaaaccttcaacta
ggcaatccattactggcggcttggggaaaaatgggacgagattttctctatacattggtg
agagatgaagaacatattccaacttatcccgtcaatgcctatcaagaaattaaatcaaac
agtttgcttgggcaattacagtctcaaattctgcatttagaaaataaaccgttaaatatc
gcaaaaaatgaccgcactttaaccctacattcttgccacagtgctatgcgagaagtggaa
gtattgcacgattatttactggatttattcaatcaagatcctaaccttacgccaaaagat
gtagttgttatggtggcagatattaaccaatacacgccttatattcaagccgttttcggg
caaaaaaatgggggtgcaccacaaattccattttcactttcggataataaactttcagaa
aatgatgtgttagtatcaagttacttaactttattaggcttaaaagaaagcaattttagt
gcagaggatgtcttagcattgttggatattcctgcgatgcgagaacgatttaatatttct
cttgctgatttaccattagtgcgagaatgggtggcggattcagggattcgtgtcggtttg
caaaaaaatcaagatggcatcaatttcaattcttggcaggctggattagaacgaatgatt
ttaggctatgcgatgcgtgaagaacagggcatttggcaagatagtctggggttaaacagc
agctatggcttaaagggcgagcttgctggaaatttatctcattttttcaccgcactttcc
gcgctgcatgaaacgctgcaacaagcacattccatcgaaaaatggcaagaaattttaacc
gcacttttatcggatttcttcgtgcgaaatgaagacacaagcgacatgattttctatatt
caagagaaaattaatgaattagctgagcatctaaaaacgctccattttactgaaaaatta
caagcagaagtgatcgccgatgtcatcacaatgaaattggaagatgcgccaaatagcctc
aaattccttgcaggaaaagtaaatttctgcaccttattaccaatgcgttcagtgccattc
aaagtggtttgtttacttggaatgaatgatgcggattacccaagaacacaaacaccaaac
agttttgatttaatgcaatatcattatcaaaaaggcgatcgtgttcgccgtgatgatgat
cgctatttgttcttagaagccttattggcagcacgtgattattgctatatcagctatgtt
ggccgttccattacagataatcaaccgaaagaaccatccgtattggtaagccaactgttg
gattatattaatcaagggcaaaaggaaaatgtccttactgtcattgaacatccaatgacc
gcatttagcccagataatttcaaatataacgagaaatttacccgctcttttgcgacaaaa
tggttgccaatagcacaatttgacacggctgctagcaattcagaatttgccgtcactatg
acagaaaaccctgaaaaaatcgaagaagttgaactggattctttagtcagctttgtggaa
aatccagtgaaatttttctttgaaaaacaacttggtgtttatttccgcgataaagatgaa
cgcattgctgacagtgaaaacttcactttaagtgggttagataattattctctcaataat
gacttaatttaccttgatgaacaaaattttgctgattattttagacaagcagaagtaaaa
ggcgtgttaccgcgcgcagagtttggaaaggtttatgctgaaaatattcgtgacaatgtt
ttagaatttaaagagaaaatagccgatcttggcgagcctaaacaggcttctatagatttt
aatattgccgtagattggcaaaacgaaaatcaaaaaatccgtttatttggttatatggac
gctttatttggcgatgattcacaagtcattcactggcattttgcgaaatacaaagatcgt
tattgtattcgtccttggatttattatttgattcaatgtgttacacaagaaaatgcgata
ccagcaaaattaattacgcaagatcaagttatcgaattaccgcctattgagcgtgaagtt
gcgcttgctcaattacaaatttacgtaaaagattatttacaaagtcaaattgaaatccaa
ttggtgccaacagtaagaaatataagtgattttattgtaggtgatgaaaattccgtttct
gaaaaacttcgggaattaactgaaagtaatggtttcgggccaaaagccgatccatattgg
tcacgagtattagcgcagacctcaagatttaaacaacctgaaaatcttgcaaaattatta
aaacaaacaaaagcttggtttggcttattattcgcacaaaagaagacaagaaaggcacaa
agctaa
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