Haemophilus influenzae C486: NTHIC486_00089
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Entry
NTHIC486_00089 CDS
T03721
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hic
Haemophilus influenzae C486
Pathway
hic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHIC486_00089 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hic03019
]
NTHIC486_00089 (rhlB)
Enzymes [BR:
hic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NTHIC486_00089 (rhlB)
Messenger RNA biogenesis [BR:
hic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NTHIC486_00089 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AJO88862
LinkDB
All DBs
Position
complement(87517..88764)
Genome browser
AA seq
415 aa
AA seq
DB search
MQQDYLSQQRFSDLSLHPIVRDTLAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTATFHHLLTHQDPNLEYPHPRALILAPTRELAVQISNDAEFLAKACGLKTALAYGG
DGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPAPQARLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVPPQGHTRHRSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacaacgattctccgatctttctctacatccgattgta
cgagatactttggcaaaaaaaggctttgatttttgtaccccaattcaggctttatccttg
cctatcagtttaaatggacgagatgtcgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacggctacttttcaccatcttttaactcaccaagatcctaatcttgaa
tatcctcacccaagagctttgattttagcacctactcgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagcctgtggattaaagaccgcacttgcctatggtggc
gatggttatgacaaacaactacaagcgattgagcgtggcgtcgatattttgattggtacg
acggggcgagtcattgattatgtgaaacaaggcgtaattggtttagatgaaatccaagtt
gtcgtgctagatgaagcggatcgaatgtttgatcttgggtttatccgtgatattcgttat
ttattgcgtaaatgccccgctccgcaagctcgtttaacgatgttattttcagcgacgctt
tcttataaagtgcgtgaattagcatttgaagatatgaatgaccctgaatatattgaaatt
gaaccagaacaaaaaacaggacaccgaattaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgaatggcctgaacgctgtattgta
tttgcgaataccaaacatcgttgtgaagaaatttggggctatttggcggctgatgggcat
cgtgtcggtttactgactggcgatgtagcacagaaaaaacgtttatcgttattaaaacaa
tttactgatggtgatttggatattttagtggcaacagatgtggctgctcgtggcttgcat
atttctgatgtgacgcatgttttcaattatgatttacccgatgatcgagaagattatgtt
catcgaattggccgtactggacgagcaggggaaagtggtgtttcgattagtttcgcttgt
gaagaatatgcgatgaatttaccagcaattgaagaatatattggccattctatccctgtg
agccaatatgaaacagaagccttgcttgaactgccgaaaccgtatcggttaaaacgtgcg
gtaccaccgcaaggacatacaagacatcgttcttatcacacaaaatag
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