Haemophilus influenzae C486: NTHIC486_00172
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Entry
NTHIC486_00172 CDS
T03721
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hic
Haemophilus influenzae C486
Pathway
hic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NTHIC486_00172 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hic03021
]
NTHIC486_00172 (rpoA)
03400 DNA repair and recombination proteins [BR:
hic03400
]
NTHIC486_00172 (rpoA)
Enzymes [BR:
hic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NTHIC486_00172 (rpoA)
Transcription machinery [BR:
hic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NTHIC486_00172 (rpoA)
DNA repair and recombination proteins [BR:
hic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NTHIC486_00172 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF6571
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AJO88945
UniProt:
A0A0D0IIP5
LinkDB
All DBs
Position
complement(174567..175553)
Genome browser
AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILTLNKSGIGPVVAADITHDGN
VEIVNPDHVICHLTDENASISMRIRVQRGRGYVPASSRTHTQEERPIGRLLVDACYSPVE
RIAYNVEAARVEQRTDLDKLVIELETNGALEPEEAIRRAATILAEQLDAFVDLRDVRQPE
IKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASIAED
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacgtttagtagatattgaacaaattagt
tcaacacatgctaaagtgatcttagaaccgttagagcgtggttttggtcatactctaggt
aatgcattgcgtcgtatccttctgtcttcaatgccaggttgtgctgtaactgaagtagaa
attgatggcgtattgcatgaatatagtagtaaggaaggtgttcaagaagatattcttgaa
gtacttttgaaccttaaaggtctagcggttaaagtacagaataaagatgacgttattctg
acattaaataaatctggaattggccctgttgttgcagcggacattacccatgatggtaat
gttgaaattgtaaatccagatcatgtgatttgtcatttaactgatgaaaacgcttcaatt
agtatgcgtatacgtgttcagcgtggtagaggatatgttcctgcttcatctcgtacacat
acgcaagaagaacgtccaattggtcgtttgcttgttgatgcttgttatagtccggttgaa
cgaattgcgtataatgtagaggcagctcgtgttgagcagcgtacagatttggataagctc
gttattgagttagaaactaatggtgcacttgagccagaagaagcaattcgtcgtgcagca
acaatcttggcggagcaacttgatgcattcgttgatttacgtgatgttcgtcagcctgaa
attaaggaagaaaaaccggaatttgatccgattttattacgtcctgtagatgatttagag
ctgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggtgattta
gtgcaacgtactgaagtagaattattaaaaacccctaatcttggtaagaaatctcttact
gaaattaaggatgttcttgcttctcgtggcttgtcacttggtatgcgccttgaaaattgg
ccgccagcaagtattgctgaagactag
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