Haemophilus influenzae C486: NTHIC486_00566
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Entry
NTHIC486_00566 CDS
T03721
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
hic
Haemophilus influenzae C486
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hic03009
]
NTHIC486_00566 (srmB)
Enzymes [BR:
hic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NTHIC486_00566 (srmB)
Ribosome biogenesis [BR:
hic03009
]
Prokaryotic type
rRNA helicases
NTHIC486_00566 (srmB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AJO89311
LinkDB
All DBs
Position
559922..561241
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AA seq
439 aa
AA seq
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MNLSQFEQFNLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLL
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
DVFNANQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREDKKKTEAKKKVKL
RHKDTKNIGKRRKPSNSNV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcccaatttgaacaattcaatctttctccagaacttttaaaggcacttgag
aaaaaaggttattcccgcccaaccgctattcaaatggaagccattcctgccgcaatggaa
gagcgtgatgtattaggctcggcaccaacgggaacagggaaaaccgctgcttttttatta
cctgcgctacaacatttattggattatccgcgtcgtaaaccaggcccaccgcgtattttg
gtattaacaccaacccgcgaactggcaatgcaagtggctgaacaagcggaagaattagcg
cagttcacccatttaaatattgcgacaattacaggtggcgtggcgtatcaaaatcacggt
gatgtattcaatgccaatcaagatttggtggtggcaacgcccggtcgtttattgcaatac
attaaggaagaaaattttgattgccgttccgttgaaatgctgatttttgatgaagccgat
agaatgttacaaatgggatttgggcaagatgcggaaaaaattgcagctgaaacccgttgg
cgaaaacaaactttgttgttttctgcaaccttagaaggggagctattggtcgattttgcg
gagcgtttattgaatgatcctgtgaaagtagatgcggaaccaagccgtcgcgagagaaaa
aaaatcaaccaatggtattaccacgcagacagcaatgaacacaaaatcaaattgctcgcg
cgttttattgaaactgaagaagtgacgcgtggaattgtgtttgttcgccgtcgtgaagat
gcgcgtgaactttccgaaacattgcgtaaacgaggcattcgttccgcatatttagaaggc
gaaatggcacaaactcaacgtaacaatgccattgataaattgaaatcaggtattgtgacg
gtattggttgcaacggatgtggctgcacgtggtattgatattgatgatgtaagccatgta
atgaattttgatttgccctatagtgcggatacttatttacatcgaattggacgtaccgca
cgagctggcaaaaaaggcacggcagtctcttttgtcgaagctcatgattacaagttactt
ggtaaaatcaaacgttatacagaggaaattttaaaggcgcgcattttagcaggtttagaa
cctcgcactaagccaccaaaagatggtgaagtgaaatcggtcagcaaaaaacaaaaggca
cgcattaaagaaaaacgtgaagataagaaaaaaacagaggcaaagaaaaaagtaaaattg
cgtcataaggatacgaaaaatatcggcaaacgacgcaagccaagtaacagtaatgtttaa
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