Haemophilus influenzae C486: NTHIC486_00761
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Entry
NTHIC486_00761 CDS
T03721
Symbol
deaD
Name
(GenBank) Cold-shock DEAD box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hic
Haemophilus influenzae C486
Pathway
hic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHIC486_00761 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hic03019
]
NTHIC486_00761 (deaD)
03009 Ribosome biogenesis [BR:
hic03009
]
NTHIC486_00761 (deaD)
Enzymes [BR:
hic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NTHIC486_00761 (deaD)
Messenger RNA biogenesis [BR:
hic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NTHIC486_00761 (deaD)
Ribosome biogenesis [BR:
hic03009
]
Prokaryotic type
rRNA helicases
NTHIC486_00761 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJO89497
UniProt:
Q19V40
LinkDB
All DBs
Position
complement(747128..748969)
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AA seq
613 aa
AA seq
DB search
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIPHLLSGNDVLGMAQTGSGKTAAFA
LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACEQFVKYAHGSRIVTLYGGQRYDIQLRA
LKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH
QTALFSATMPEPIRRITKRFMNDPKEVKIKVNNENAPDIEQSCWYVHGVRKNEALLRFLE
VEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIE
HLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIA
AAMLMLLQGKQKLILPPDPPMEKRRRERNDRGDRRENPRSAERRGERKGYGNPQAMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRV
LNKQMQMSFLGAVKSDNSRGSDDFNGKRKGRGSDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaattacttttaatgacttaggcttacctgagttcatcttaaaagctgtt
tctgacttaggttttgaaaccccttctccaattcaacaagcttgtatcccacatttgctc
agtggcaatgatgtgctaggtatggcacaaacaggtagtggtaaaaccgctgcttttgca
ctgcctttattagcacaaatcgatccaagtgaaaaacatccacaaatgttagtaatggca
cctactcgcgaacttgctattcaagttgccgatgcgtgcgaacaatttgttaaatatgct
catggctcccgcattgttaccttatatggcgggcaacgttatgacatccaacttcgtgca
ttaaaacaaggcgcacaagtggttgtgggtacaccaggtcgtattcttgaccatattcgc
cgcggcacattaaatctttctgaacttcgttttatcgtattagatgaagccgatgaaatg
ctacgtatgggtttcattgatgatgtagaaaccgtgatggctgaactaccagaaaatcat
caaactgcgttattctctgcaacaatgcctgaaccgatccgtcgtattacgaaacgtttt
atgaatgatccgaaagaagtgaagatcaaagttaataacgaaaatgctccagatattgag
caaagttgctggtatgtacacggcgtgcgtaaaaacgaagctcttcttcgtttcttagaa
gtggaagattttgatgccgcaattatttttgctcgcactaaaactggcacgttagacatt
acagaactacttgaaaaaaatggtttccgttccgccgcacttaatggcgatatgacacaa
caactccgcgaacaaaccctcgatcgcttacgtaacggcagtttagatattgtagtagca
accgatgtggctgctcgtggtattgatattgaacgtatcagccttgtggtaaactacgac
attccgctggatgcagaatcttatgtacatcgaattggccgtactggtcgtgcaggtcgt
tctggtcgtgctttattattcgttgaacctcgtgagcgtcgtttacttcgtaatattgaa
cacctaatgaaaaaaggtatcaatgaagtagaattgccaaatcatcttgtgttacaagaa
tgccgccgcaaaaaattcgttgcaaaaattacgaaacaactagagcatcacgatttagag
caatatcgtagtttattagaagacttattcacagctgatcaagatcaagaagatattgct
gctgcaatgttaatgttgttacaaggtaaacaaaaattaattcttccacctgatccgcca
atggagaaacgtcgtcgtgaacgtaatgatcgcggtgatcgtcgtgaaaatccacgttca
gctgaacgtcgtggcgaacgtaaaggctacggaaatccacaagcaatggatttatatcgt
atcgaagtcggtcgtgcagatggtgtagaagttcgtcatatcgttggtgcgattgctaac
gaaggcgatattaacagccgttatattggtcatattaaactttatgatgattacactacc
gttgaattgccacaaggtatgccgaaagaattattgcaacaattcggaaaaacacgcgta
ttgaataaacaaatgcaaatgtctttcttaggtgcagtaaaatccgataattctcgtggc
agtgatgattttaacggtaaacgtaaaggtcgtggtagcgatttccgtggagaacgcgga
cgtgaacgtggcaatgataatcgtggaaatcgtaaatttaatgaaaaaagtaaccgcact
tttagcgataaaccacgtcgtgatcgtagatcatcattctaa
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