Haemophilus influenzae C486: NTHIC486_00797
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Entry
NTHIC486_00797 CDS
T03721
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hic
Haemophilus influenzae C486
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hic03021
]
NTHIC486_00797 (rapA)
Transcription machinery [BR:
hic03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NTHIC486_00797 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_22
DUF123
Motif
Other DBs
NCBI-ProteinID:
AJO89524
LinkDB
All DBs
Position
786981..789752
Genome browser
AA seq
923 aa
AA seq
DB search
MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAIAQAPLSRIVFSKGET
LSHQAGWQGEILDVQNMNGLLFYLVKNPQDEDVIVQERDISPIISFSQAKDRLFSAQIDR
STHFALRYRTLCHQQAQFKSPLRGLRGTRAGLIPHQLHIAAEVGNRVNPRVLLADEVGLG
KTIEAGMILQNQLFAEKVQRVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDLDA
VNPFTTESLIICSLNWLETHPNRVEQALDAQFDCLIVDEAHHLVWSETSPSAAYLFVEQL
ARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPVVNAVESLLAN
KALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQELIQALIDRHGTGRMLFRNT
RQGGEGFPHRVYHQITLSEENDKIDWLIDFLKLHRDEKILVICQTAATAIQLEQILRERE
AIRAAVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFATNLVLFDLPTNP
DLLEQCIGRLDRIGQKRDVQIYVPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFA
DELEKVRSNSTALSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHGGEQAQALADQ
IADEDNSPELVNFALKLFDIIGVEQEDLGVNSIVISPTGTMLVPDFPGLKEEGVTVTFDR
ELALAREEMEFLTWDHPMIRQGIDLVASGDIGKAAMALLVNKQLPAGTLLIELIYVVESQ
SPKGLQLNRFLPPTPIRLLLDNKGNNMGEQVAFETLHSKLKPLGKNIANQMVKMARSNIE
DLSTRGDQLVKSLAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQ
SLDELSKANWRLDCLRVIVTNKE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgctattggtcagcgttggttaagtgaaagtgaaaacgctttaggattaggc
gttattaccgcattagatcaacgaactgttactatttatttccccgcagcagatgaaacg
aggatatatgctatagcgcaagcacctttaagtcgaattgtatttagcaaaggcgaaaca
ttatcccatcaagctggctggcaaggcgagattttagacgttcaaaatatgaacggtttg
ttgttttatttagttaaaaatccacaagatgaagatgttattgtgcaagaacgtgatatt
tcgccgattatttcttttagtcaagcgaaagatcgtctgttttcagcgcaaattgatcgc
agtactcattttgcattgcgttatcgcacgctttgtcatcagcaagcacaatttaaatcg
ccattgcgtggtttacgcggaacgcgtgcgggtttaattccccatcagcttcatattgca
gctgaagtcggtaatcgagttaatcctcgcgtgttattggcggatgaggttggtttaggg
aaaaccattgaagcaggaatgattttgcagaatcaactttttgctgagaaagtgcaacgt
gttcttattatcgtgccagaaaccttgcaacatcaatggctggtggaaatgcttcgtcgt
tttaatttgcattttgcactttttgatgaagaacgttgcaacgattttgatcttgatgcc
gttaatccgtttacaactgaaagcttaattatttgttcgctgaattggttagaaacgcat
ccaaaccgagtagagcaggcacttgatgctcaatttgattgcttaattgtggacgaagca
catcatctggtgtggtctgaaacctcgccaagtgcagcttatttattcgttgaacagctt
gctcgtatcattccatctgtcttgttactcacggcaaccccagaacaacttgggcaagaa
agtcattttgctcgtttgcgcttactggatccagaacgtttctttgattatcaaaccttt
gtgaaagagcaggaacactatcaacctgtggttaatgccgttgaatctttgttggcaaat
aaggcattaagtgcggtagaaaaaaatcatatttctgatttgttgcttgaacaagatgtc
gagccactttttaaagcgattgcatcaaataatgatgaagaacagcagcgtgcccgtcag
gaattgattcaagccttaattgatcgtcacggcacggggcgaatgttattccgcaataca
cgtcaagggggggaaggttttccgcaccgtgtttatcatcaaattactctctctgaagag
aatgataaaattgattggctgattgatttcctcaaactccatcgcgatgaaaaaatttta
gtgatttgccagacggcggcaactgcgattcagttagaacaaattttacgtgaacgtgag
gcgattcgtgccgcagtgtttcacgaaaaaatgtcgattatcgaacgggatagagctgcg
gcttattttgcggatttagaaaacggcgcgcaggttttactgagctcgagtattggctcg
gaagggcgtaacttccaattcgcaacaaatttagtgttatttgatttaccgacaaatcct
gatttattggaacaatgtattggccgattagatcgtattggacaaaaacgtgatgtgcaa
atttatgtgccttgtgcgaaagattcgcctcaaagtcgtttagcacgttggtacaatgag
ggattgaatgcttttgaacaaacttgtccaatgggaatggcattattttctcagtttgcc
gatgagttggaaaaagtgcggtcaaattctaccgcactttcagagaatgaattttctgga
ttattaaaacaaactaaaaccgcacgggaaaaactcaagattgagttagaaaaaggtcgc
gatcgtttattagagctaaattctcatggcggtgagcaagcacaagcgttagcggatcaa
atcgctgatgaagataattcgccagagcttgtgaattttgctttaaaattatttgatatt
attggcgtagagcaagaagatcttggggttaatagtattgtaattagtccaactgggaca
atgcttgtgcccgattttccaggtttaaaagaagaaggtgtgacggttacctttgatcga
gaacttgcccttgcccgcgaagaaatggaattcttgacttgggatcatcctatgattcgt
caaggtattgatcttgttgcttcgggtgatattggcaaagccgcaatggcattgcttgtg
aataaacaactgcccgctggaaccttattaattgaattgatttatgtggtggaaagccaa
tcgccaaaagggttgcagctcaatcgtttcttgccgccaacgcctattcgtctgttgctt
gataacaaaggaaataacatgggtgagcaggttgcctttgaaaccttgcatagcaaattg
aaaccacttggtaaaaatattgctaatcaaatggtaaaaatggcacggagcaacattgaa
gacttgagcacgcgaggtgatcaactggtaaaatccttggcagaaccgattattgctgaa
gctaaaaatcaagcagatcaacaattaagcgcagaaattaatcgtttacaggctttgcga
gcagtgaataaaaatattcgccagagcgaaattgatattttggaacaacaacgaacacaa
tcactggatgagctttctaaagcaaattggcgtttggattgcttgcgtgtcattgtgacg
aacaaggaataa
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