Haemophilus influenzae C486: NTHIC486_00979
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Entry
NTHIC486_00979 CDS
T03721
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hic
Haemophilus influenzae C486
Pathway
hic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHIC486_00979 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hic03019
]
NTHIC486_00979 (pcnB)
Enzymes [BR:
hic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NTHIC486_00979 (pcnB)
Messenger RNA biogenesis [BR:
hic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NTHIC486_00979 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AJO89684
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All DBs
Position
complement(988595..989953)
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AA seq
452 aa
AA seq
DB search
MPKARAKKSEQTRRYDKNVIKAAQFDISPRDFSRNALNVVEKLQRQGFEAYIVGGCIRDL
LLGKKPKDFDVATNARPEQIQNIFQRQCRLVGRRFRLAHIMFGRDIIEVATFRANHSDAR
NENQAKQSNEGMLLRDNVYGTIEQDAVRRDFTVNALYYNPQDNTLRDYFEGIKDLKAGKL
RLIGDPVTRYQEDPVRMLRSIRFMAKLDMFLEKPSEQPIRELAPLLKNIPPARLFDESLK
LLQAGQGVKTYRLLRQYGLFEQLFPALSSYFTEKEDSFAERMIVTALTSTDERVADKLRI
NPAFLFAAFFWYPLREKVEILKNEGGLNNHDAYALAGNEVLDLFCRALAAPRRHTAVIRD
IWFLQLQLLKRTGSAPMRTMEHPKFRAGFDLLAMRAEIEGGETIELAKWWHEYQFSNGEQ
REQLIHEQQRLHPKPKKKYYRPRRRKITRSAE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagcgcgagcaaaaaaatcagaacaaacacgtcgctatgataaaaatgtgatt
aaagcggctcaatttgatatttctccgcgtgattttagccgtaatgcactcaatgtagtg
gaaaaactgcaacgtcaaggtttcgaggcctatatcgtcggtggatgtatccgtgattta
ttgctcggtaaaaaaccaaaagattttgatgttgcaacaaacgcccgtcctgagcaaatc
caaaacattttccaacgccaatgccgtttagtgggtcgccgtttccgcttagcacatatt
atgtttggtcgagatattattgaagtcgccactttccgtgccaatcacagtgatgctcgc
aatgaaaatcaagcgaaacagagcaatgaaggcatgttactgcgcgataatgtttacggt
acgatcgaacaagatgcagtgcgccgagactttacggtcaatgcgctgtattacaatcca
caagataatacgttacgagattatttcgagggcattaaagatctcaaagcaggaaaacta
cgcttaattggcgatcctgttacacgttatcaagaagatcctgtgcgcatgctacgctcc
attcgttttatggcaaaacttgatatgttccttgaaaaaccaagtgaacagccaattcgt
gaacttgcgcctttattaaaaaatattccaccagctcgcttatttgatgaaagtttaaaa
ttattgcaggctggacaaggggtaaaaacctatcgtttattacgccaatatggtttattt
gaacaacttttccctgcattaagctcatattttacagagaaagaagatagctttgcggaa
cgcatgatcgtcactgcacttacttctacagatgaacgtgttgcggataaacttcgtatt
aatcctgcattcttatttgcggcatttttctggtatccattacgcgaaaaagtggaaatc
ttgaaaaatgaaggtggtttaaataatcatgatgcttatgctttagcgggtaatgaagtt
ttagacttattctgccgtgctttagctgcaccacgtcgtcatactgcggtcattcgtgac
atttggttcttacaattgcaattattaaaacgtactggctcagcaccaatgcgtaccatg
gaacatccaaaattccgtgctggctttgatttattggctatgcgagcagaaattgaaggt
ggcgaaaccattgaattggccaaatggtggcacgaatatcaattcagcaatggtgaacag
cgcgaacagttgatacacgagcaacaacgcttacatcctaaaccaaagaaaaaatactac
cgtccacgccgtcgtaaaataacacgttcagcagagtaa
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