Haemophilus influenzae C486: NTHIC486_01531
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Entry
NTHIC486_01531 CDS
T03721
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hic
Haemophilus influenzae C486
Pathway
hic03410
Base excision repair
hic03430
Mismatch repair
hic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NTHIC486_01531 (recJ)
03430 Mismatch repair
NTHIC486_01531 (recJ)
03440 Homologous recombination
NTHIC486_01531 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hic03400
]
NTHIC486_01531 (recJ)
DNA repair and recombination proteins [BR:
hic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NTHIC486_01531 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NTHIC486_01531 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NTHIC486_01531 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJO90210
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Position
complement(1579242..1580969)
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AA seq
575 aa
AA seq
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MKKLIKRREIPVGNSVSNHPLLDRLYRARHIQNTKELDRTLKSMLNPNQLYGIDQAVNLL
VEAYQQQQKIVIVGDFDADGATSTALSVLALRQLGFSDVDYLVPNRFEQGYGLSIPVAEM
AIEKGVQLLMTVDNGVSSFDGVAFLKDKGIRVLVTDHHLPPETLPPADAIVNPNLSQCHF
PSKSLAGVGVAFYLMLAVRAKFRELGIFTAETQPNFTDLLDLVALGTIADVVPLDQNNRI
LAYQGLMRIRARHCRLGIIALAEVANRNVEQFTSSDLGFCIGPRLNAAGRLDNMSIGVEL
LLANEMSKARELALDLDQLNQTRKEIEAGMKLEAIKICQNLTALFKELPYGIMLYQPDWH
QGVLGIVSSRIKDQYHRPVIAFAQDSEGILKGSARSIEGLHMRDVLERIHSQHPNMILKF
GGHAMAAGLSIREEHFADFQHIFNQTVADWFDEEHMQSIIWTDGELNSNEFNLETAELIK
SVGTWGQGFPEPCFDGEFKILDQRAIGQNKNHLKMLLEPKQGGVLLDAIAFNINTRLYPD
LSIKQARLAYKLDINEFRGNRSLQLLVDYIEPIDE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaacttatcaaacgccgtgaaattccagttggaaattctgtttcaaaccatccc
ttattagatcgactttatcgcgctcgtcatattcaaaacaccaaagaattagaccgcact
ttgaaatcaatgctcaatccaaatcagttatatggcattgatcaagctgtaaatttatta
gtggaagcctatcaacaacagcaaaaaattgtgattgttggggattttgatgctgatggt
gcaaccagcacagcattgagtgtgctggctttaagacaacttggcttttctgatgtggat
taccttgtgccaaatcgatttgaacaaggttatggcttgagtattcctgtggctgaaatg
gcgattgaaaagggtgttcagttgttaatgacggtggataacggcgtttcgtcttttgac
ggtgtggcatttttgaaagacaaaggcattcgagttttagtcacggatcatcatttaccc
cccgaaactttgccgccagccgatgcgattgttaatcctaatttaagtcagtgtcatttc
ccttcaaaatccttagcaggtgtgggtgtggcattttatttgatgttagccgtacgagca
aaatttcgagaactcggtatttttacggcagaaacacaacctaattttactgatttgctc
gatctggtggcactaggcactatagctgatgttgttccgttagatcaaaataatcgtatc
cttgcttatcaaggtttaatgcgtatccgtgctagacactgccgtctcggtatcattgcg
ttggcagaagtggctaaccgtaatgttgaacagtttacttcaagtgatctaggtttttgt
atcggacctcgtttaaatgcggcagggcgtttagataatatgtcgattggtgtagagctt
ttgctggcgaacgaaatgtcaaaagccagagaattagctttagatcttgaccaactcaat
caaacgcgtaaagaaattgaagcaggtatgaagcttgaggcaataaaaatttgtcaaaat
cttaccgcactttttaaagagttaccctatggtattatgctttatcaaccagattggcat
cagggcgtattaggcattgtgtcatcaaggattaaggatcaatatcatcgtccagtgatt
gcctttgcacaagatagtgagggaattttgaaaggttccgcgcgttctattgaggggtta
catatgcgtgatgttctggagcgtattcattcgcaacatcctaatatgattttaaaattt
ggcggacacgcaatggcggcaggcttgagtattcgcgaagaacattttgcggatttccaa
catatttttaatcaaaccgttgccgattggtttgatgaagaacatatgcaaagcataatt
tggacagatggcgaactaaattcaaatgaatttaatcttgaaacggcagagctgataaaa
tcggtaggcacttgggggcaagggtttcctgagccttgctttgatggcgaatttaaaatt
ttagaccagcgcgcaattgggcaaaataaaaatcatctaaaaatgttgctagaaccgaaa
caaggcggggttttattagatgcgattgcatttaatattaatacaagattgtatcctgat
ctttcaattaaacaggctcgtttagcctataaattagatattaacgaatttcgtggcaat
cgtagcctacaattattggtagattatattgagccgatagatgagtga
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