Haemophilus influenzae R2846 (nontypeable): R2846_0369
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Entry
R2846_0369 CDS
T01980
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hie
Haemophilus influenzae R2846 (nontypeable)
Pathway
hie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2846_0369 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hie03019
]
R2846_0369 (deaD)
03009 Ribosome biogenesis [BR:
hie03009
]
R2846_0369 (deaD)
Enzymes [BR:
hie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R2846_0369 (deaD)
Messenger RNA biogenesis [BR:
hie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R2846_0369 (deaD)
Ribosome biogenesis [BR:
hie03009
]
Prokaryotic type
rRNA helicases
R2846_0369 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
ADO95823
LinkDB
All DBs
Position
complement(356760..358601)
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AA seq
613 aa
AA seq
DB search
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA
LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACEQFVKYAQGTRIVTLYGGQRYDIQLRA
LKQGAQVIVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH
QTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIEQSCWYVHGVRKNEALLRFLE
VEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIE
HLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQENIA
AAMLMLLQGKQKLILPPDPPMEKRRRERNDRGDRRENPRSAERRGECKGYGNPQPMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRV
LNKQMQMSFLGAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaattacttttaatgacttaggcttacctgagttcatcttaaaagctgtt
tctgacttaggttttgaaacaccttctccaattcaacaatcttgtatcccgcatttgctc
aatggcaatgatgtgctaggtatggcacaaacaggtagtggtaaaaccgctgcctttgca
ctgcctttactcgcgcaaattgatccaagtgaaaaacatccacaaatgttagtgatggca
cccactcgcgaacttgctattcaagttgccgatgcgtgcgaacaatttgttaaatatgca
cagggcactcgcattgttaccttatatggtggccaacgttatgacatccaacttcgtgca
ttaaaacaaggcgcacaagtgattgtgggtacaccaggtcgtattcttgatcatattcgt
cgcggaacattaaatctttctgaacttcgttttatcgtattagatgaagccgatgaaatg
ctacgcatgggtttcattgatgatgtagaaaccgtcatggctgaattaccagaaaatcat
caaactgcgttattctctgcaacaatgcctgaaccgatccgtcgtattacgaaacgtttt
atgaatgatccacaagaagtgaagatcaaggttaataacgaaaatgccccagatattgag
caaagttgttggtatgtgcacggcgtgcgtaaaaatgaagcgcttcttcgtttcttagaa
gtggaagattttgatgctgcgattatttttgctcgcactaaaacaggtactttagatatt
acagaactacttgaaaaaaatggtttccgttctgccgcacttaatggtgatatgacacaa
caattacgcgaacaaaccctcgatcgcttacgtaacggcagtttagatattgttgtggca
accgatgtggccgcacgcggtattgatattgaacgtatcagccttgtggtgaactacgac
attccgcttgatgcagaatcttatgtacaccgaattggccgtactggtcgtgctggtcgt
tctggtcgtgctttattatttgttgaacctcgcgagcgtcgtttacttcgtaatattgaa
cacctaatgaaaaaaggtatcaatgaagtagaattgccaaatcatcttgtgttacaagaa
tgccgccgcaaaaaatttgtcgccaaaattacgaaacaactcgagcatcacgatttagag
caatatcgtagtttattagaagacttattcacagccgatcaggatcaagaaaatattgct
gcagcaatgttgatgctgcttcaaggcaaacaaaaactcattcttccacctgatccacca
atggaaaaacgtcgtcgtgaacgtaatgatcgcggtgatcgccgtgaaaatccacgttca
gctgaacgtcgtggcgaatgtaaaggctatggaaatccacaaccaatggatttatatcgt
atcgaagtcggtcgtgcagatggtgtagaagttcgccatatcgttggtgcgattgctaac
gaaggcgatattaacagccgttatattggtcatattaaactttatgatgattacactacc
gttgaattgccacaaggtatgccgaaagaattattgcaacaattcggaaaaacacgagta
ttgaataaacaaatgcaaatgtctttcttaggtgcagtaaaatccgataattcccgtggc
agcgatgattttaacggtaaacgtaaaggtcgtggtggcgatttccgtggagagcgcgga
cgtgaacgcggcaatgataatcgtggaaatcgtaaatttaatgaaaaaagtaaccgcact
tttagcgataaaccacgccgtgatcgtagatcatcattctaa
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