Haemophilus influenzae R2846 (nontypeable): R2846_0954
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Entry
R2846_0954 CDS
T01980
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hie
Haemophilus influenzae R2846 (nontypeable)
Pathway
hie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R2846_0954 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hie03400
]
R2846_0954 (recB)
Enzymes [BR:
hie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R2846_0954 (recB)
DNA repair and recombination proteins [BR:
hie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R2846_0954 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
ResIII
AAA_12
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADO96358
LinkDB
All DBs
Position
complement(1002693..1006328)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSRPLNVEEILVV
TFTEMATEELKKKIRERITDAIDKLIAFAETQDKSAFKNDEFLTALCDNLDIFEAIHRLK
LAEQNMDLAAIYTIHGFCRRMLMQYAFHSGIHFNLELIKDQSDLLVRFANEFWREHFYPL
DFESANFIATELVSPAKVLSLLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALN
ELKAFWLESADEILAIITNELEKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKPATPFYSPIFAELEKRVNALMTPDLLSKLT
LYHYRQGLQQKLLDYKLNHQEKSFDDLLRLLCEALQDAQGDELAEMIRFQYPFAMIDEFQ
DTDSQQYAIFSKIYRDNPEKNTGFIMIGDPKQAIYRFRGADIFTYLKASDEAQSRFELTK
NYRSEKHLVDGVNALFDFPQSPFIYQNIKFTAVDSRDDHLRFYLNGKAEPAYRFYLTESD
KVNKTEMAKICAISIQHWLKSAAENQAVFQNEDTRKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFGLNAADIHQIQ
QNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISERLLSQATGERDLTDFLHLAE
ILQQAATLHESEAALLSWFEKQIQGEGRQEAQIRLESERQLVKIVTIHKSKGLEYDLVWL
PFLAVPSKDPSKKDINIYYSKERDETLWDIENRNLNALCEETFAEELRLLYVALTRAKYQ
MAFALPAQFDKKWNALHYVLSQGEIGKEINLSNSKDTETLLQAFKEKMRDNVEICTKPNL
EAFPALSINTKNDELKAAEFTGNIEQDWRITSFTSIEQGHRRQNYFAESAEKKHAVFDDA
KDYDSQNAIEISTALLNENESNILDLPRGKQVGTALHRHFENCYFSDLANIEEIDKLRQS
LQLDETFTEPLQNWLQQISHTPLSNEIGIALADLANKDCIKEMPFYLAIRAHFDVEAFNR
ALKAHHHLPSEPLQFEQIQGMVRGSIDLVFRHNGKYYLIDYKSNFLGSTLADYNQEALKK
EMLHSHYDWQYLIYTLALHRYLQSVVPHYDYARDFGGVFYLFLRGMNGEPQSGVFYDRPS
VELITELDGVF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacaatcccactgaatcctatcacgttgcctttaaatcaaattagcttaatc
gaagcgtccgctggtacagggaaaacctacactattggttctttatatctccgactttta
ttaaaggcgggggaaaataacttttctcgtccgttaaatgtggaagaaattctggtggta
acatttacggaaatggcaacagaagaactcaagaaaaaaattcgtgagcgtataacagat
gcgattgataaactcattgcctttgcagaaacccaagataaatccgcatttaaaaatgat
gaatttcttaccgcactttgtgataatttagatatttttgaggcaattcatcgcttaaag
ttagctgaacaaaatatggatctggcggcgatttataccattcacggtttttgtcgccgt
atgttgatgcaatatgctttccattctggcattcatttcaatttagaattaataaaagat
caatctgatttattagttcgttttgctaatgaattttggcgagagcatttttatccgttg
gattttgaatctgcgaattttatcgcgacagaattagtatcaccagcaaaggtgttgtct
ttgttgaaagcggatttaggtaaagatttgcaggtggagattgaaaataaacaggcgtta
tctgtaccaatacaaatctttttaccgcaatatcttggtggttatcaaaaggcgttgaat
gaattaaaggcattttggttagaaagtgcggatgaaattttagcgattattaccaatgaa
ctggagaaagattatccaaaagatcagttgaaatcgttaaatcgtaaaaagtaccaagta
aagcgtttaggggattggattaataaaatcaatcaatggtcaaataatcctagagattat
caaattaataccacattgaaagactatttcctacaatcatctattgagaaaaattgcgaa
gaatcaacggataaaaataaagataaaaaacccgcaacgcctttttattccccgattttt
gcagagcttgaaaagcgcgttaatgccttaatgacaccagatttactaagcaaactcact
ctttatcattatcgacaaggcttacaacaaaaacttttagactataaactaaatcatcaa
gaaaaatcctttgatgatttattgcgtttgctttgtgaagccctgcaagatgcgcaaggg
gatgaattagcggaaatgattcgtttccaatatccttttgcgatgattgatgaatttcag
gatacggattcacaacaatacgctattttttcaaaaatttatcgtgataatcccgaaaaa
aatactggttttattatgattggtgatccgaagcaggcgatttatcgtttccgtggcgca
gatatttttacttatctaaaagcctcagacgaagcccaatctcgctttgaactcactaaa
aattatcgttcagagaagcatttggttgatggtgtaaatgctttattcgattttcctcaa
tcgccatttatttatcaaaatattaaatttactgctgttgattctcgtgatgatcatctg
cgattttatttaaatggcaaagccgaaccagcttatcgtttttatctaactgaaagtgac
aaagtgaataaaactgaaatggcaaaaatatgtgctatttctattcaacattggctaaaa
agtgcggctgaaaatcaggcagtttttcaaaatgaagatactcgtaaaacattgcaagcg
gcaaatattgccgtattagtgcgtgataaaaatgaagcggctttagtaaaaaatgaattg
caaaaattagggatcgcgtcagtttatctttctgatcaaaatagcgtatttgatagcaat
gttgcgaaagaattagcttgggtgcttaaagcctgtttgaatgtggcagaacgtccaatt
ttgaacgcgattgcgaccgcactttttggcttaaatgcagcggatattcatcaaattcag
caaaatgaagcagattggcaacgttgggcagatagttttgctcaataccaacaaacttgg
caacgccaaggaatattggcaatgttacatcaaattttattggagcaaggcatttcagaa
cgcttattaagccaagccacgggcgagcgagatttaacggatttcctacatttggcagaa
attttacaacaagctgccacgctacacgaaagtgaagcggcattgctcagttggtttgaa
aaacaaattcaaggcgaaggtcgtcaagaggctcaaattcgtttagaaagtgaacgccag
ttggtaaaaatagtgacaatccataaatctaaaggcttagaatatgatttagtttggcta
ccatttttagctgtgccgagcaaagatccaagtaaaaaagacatcaatatttattattct
aaagaacgagatgaaaccttatgggatatagaaaatcgcaatttaaacgctctttgtgaa
gaaacttttgctgaagaattacgtttactttatgtggctttaacacgtgccaaatatcaa
atggcattcgcgttgcctgcacaatttgataaaaaatggaatgccttacattatgtatta
agccaaggtgaaataggcaaggaaataaatttgtcgaattctaaagataccgagacgttg
ttgcaagcctttaaagaaaaaatgcgagataatgtggaaatctgtactaagccaaatcta
gaggcttttccggctttatctatcaatacaaaaaatgatgagcttaaagccgcagaattt
acgggcaatattgagcaagattggcgaataaccagttttacttcaattgaacaaggtcat
cgccgacaaaattatttcgctgaaagtgcggagaaaaaacacgctgtttttgatgacgca
aaagattacgatagtcaaaatgctattgaaatatccaccgcacttttaaacgaaaatgaa
tcaaatattttagatttaccacgaggtaaacaagtcgggactgcattgcatcgccatttt
gaaaattgctatttttctgatttagcaaatatagaagaaattgacaaattacgacaatcc
ttacagttagatgaaacctttacagaaccgctacaaaattggctacaacagatttcacat
acgccactttctaatgaaataggaatagcattagctgatttggcaaataaagattgcatt
aaagaaatgccattttatctggcaattagggcacattttgatgttgaagcgtttaatcgt
gcgttgaaagcccatcatcatttaccaagcgagccacttcaatttgagcaaattcagggc
atggtgagaggttcgattgacttagttttccgccataatggaaaatattatcttattgat
tataaatctaatttcttaggttcaacccttgctgactacaatcaagaggcattgaaaaaa
gaaatgttacacagtcactatgattggcaatatttaatttatacgctggcattacatcgt
tatttacaaagcgttgtgcctcattacgattatgcacgagatttcggcggggtattttat
cttttcttacgtggaatgaacggtgaaccacaatctggcgtattttacgatcgtccaagc
gttgaattaatcacagaattagacggggtgttttaa
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