Haemophilus influenzae F3031 (nontypeable): HIBPF_02400
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Entry
HIBPF_02400 CDS
T01395
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
hif
Haemophilus influenzae F3031 (nontypeable)
Pathway
hif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HIBPF_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hif03021
]
HIBPF_02400
03019 Messenger RNA biogenesis [BR:
hif03019
]
HIBPF_02400
Transcription machinery [BR:
hif03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HIBPF_02400
Messenger RNA biogenesis [BR:
hif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HIBPF_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
CBY80481
LinkDB
All DBs
Position
247417..248679
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AA seq
420 aa
AA seq
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MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKIDQV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPDVELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAERRVFPAID
FQRSGTRKEDLLTTADELQKMWILRKILNPMDEVDAMEFLIDKLMMAKTNEEFFEVMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaacagaacttaaaaatacgcctgtttctgatcttgtgaaactcggcgaggag
caaatgggcttagaaaatttagctcgtttgcgtaaacaagatattgtctttgcaatctta
aaacagcacgccaaaagtggcgaagatattttcggcggtggtgtgttagaaattttacca
gatggttttggtttccttcgttctgccgacagttcctaccttgcaggccctgatgatatc
tatgtttccccaagtcaaattcgtcgttttaatcttcaaactggggataaaatcgaaggc
aaaattcgtccaccaaaagaaggcgaacgttattttgcacttttaaaaattgatcaagtt
aatgatgacaaaccagaagtttctcgtagcaaaatcttatttgaaaacttaacgccattg
cacgctaattcgcgtctaagaatggaacgaggcaatggctcaacagaagatttaactgcc
cgtattttggatttagcctcgccaattggtaaagggcagcgtggtttgatcgtagctccg
ccaaaagcgggtaaaacaatgttgttgcaaaatattgcgcaaagtatcacgcataattat
cctgatgtggaacttatcgtattactgattgatgaacgcccagaagaagttacagaaatg
caacgttcagtaaaaggcgaagtcattgcttctacttttgatgagccagcaactcgtcac
gttcaagtggcagaaatggtaatcgaaaaagcgaaacgttcagtagagcataaaaaagat
gtggtgattttacttgactctattacccgtttagcacgtgcttacaatacagtcactcca
gcttcaggtaaaattttgtctggtggtgtggatgctaacgcattgcaccgtccaaaacgt
ttcttcggtgctgcgcgtaatgtggaagaaggcggtagtttaacgattattgccactgcg
ctagtagatacgggttcgaaaatggatgaagtgattttcgaagaatttaaaggtacaggt
aatatggaattacacctttctcgtaaaattgcagaaagacgtgtattcccagctattgac
tttcaacgctctggtactcgtaaagaagacttactcacaacagcggacgaattacaaaaa
atgtggattcttcgtaagattcttaatccaatggatgaagtggatgcaatggaattcttg
attgataagctgatgatggcaaaaaccaacgaagagttttttgaagtgatgaaacgttcg
taa
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