Haemophilus influenzae F3031 (nontypeable): HIBPF_04570
Help
Entry
HIBPF_04570 CDS
T01395
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hif
Haemophilus influenzae F3031 (nontypeable)
Brite
KEGG Orthology (KO) [BR:
hif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hif03016
]
HIBPF_04570
Enzymes [BR:
hif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HIBPF_04570
Transfer RNA biogenesis [BR:
hif03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HIBPF_04570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
TRAM
ATPase_RavA_C
Motif
Other DBs
NCBI-ProteinID:
CBY80639
LinkDB
All DBs
Position
393691..395670
Genome browser
AA seq
659 aa
AA seq
DB search
MFQDNPLLAQLKQQIHDSKEQVEGVVKSTDKAYGFLECDKKTYFIAPPSMKKVMHGDKIK
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDKKLQVLVDHPSINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICRADDELAPWWVTLARHEQSRYPVQGAEP
YEMLDQKTRENLTALHFVTIDSESTMDMDDALYIEPIAQNSTQTGWKLVVAIADPTAYIA
LDSQIEQEAKQRCFTNYLPGFNIPMLPRELSDELCSLIANETRLALVCYIETDLAGNITA
KPNFVSAYVQSKAKLAYNKVSDYLEQADNAWQPEMPETAQQIHWLHQFTKARIQWRKTHS
LFFKEKPDYAFVLAENGKVQEIKAEYRRIANQIVEEAMIIANICAAQFLHEQAKTGIFNT
HSGFDKKFLENAHHFLMANLANEQNQAELAERYSVENLATLNGYCQMRHDIDPLESDYLE
LRLRRYLTFAEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQPYEKPQN
DVLARLQEARRQNRLVERDIADWLYCRYLAPKVAENVEFNAEVQDVMRGGLRVQLLENGA
SMFIPASTLHNNKEEMQVNSDEIALYIKGERTYKIGDMVKVKLTEVKEATRSIVGEILQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatcctctactcgcacaacttaaacaacaaatccacgacagcaaagaa
caggttgagggcgtggtaaaaagcacagataaagcctacggttttttagagtgcgataaa
aaaacctatttcatcgcaccgccatcaatgaaaaaagtgatgcacggcgacaaaatcaaa
gccactattgaaaaacaaggcgacaaagaacaagccgagccagaagccttaattgagcca
atgctcacacgttttatcgcaaaagtgcggttcaataaagacaagaaattacaagtgctg
gtggatcacccaagcattaatcaacccattggtgcacaacaggcgaaatcggtaaaagaa
gaattgcaagagggcgactgggtcgtcgcaaatttaaaaacccatccattacgtgacgat
cgctttttctatgccactattaatcagtttatttgccgagctgatgatgaattagcccct
tggtgggtcacattggcacgccacgaacaatcgcgctatcccgtgcaaggcgcagaacct
tatgaaatgttagatcaaaaaacacgcgaaaatctgaccgcacttcattttgtaaccatt
gattccgaaagcacaatggatatggacgacgccttatatatcgaacccatagcacaaaac
agcacacaaacaggctggaaattagtggtcgccattgctgacccaaccgcttacatcgcc
ttagattctcaaattgaacaagaagccaaacagcgttgcttcacaaattatttaccgggc
tttaacattccaatgttaccccgtgaattatctgatgaattatgttccttaatcgccaat
gaaacccgcctcgcacttgtctgttatatcgaaaccgatcttgcaggcaacatcacagcc
aaaccgaattttgtttccgcttatgtacaatctaaagccaaactggcttacaacaaagtg
tcggattatttagaacaggcagacaatgcatggcagccagaaatgccagaaacagcacaa
caaattcactggctacatcaatttaccaaagctcgcattcaatggcgcaaaacccattcc
ttattctttaaagaaaagcccgattatgcctttgtgctggcagaaaacggcaaagtgcaa
gaaatcaaagcagaatatcgccgtattgccaatcaaattgtggaagaagcaatgattatt
gccaacatctgcgccgcacaatttttacacgaacaggcaaaaacaggcattttcaacacc
catagcggttttgataaaaaattcttagagaacgcgcaccatttcttaatggcaaattta
gccaatgaacaaaatcaagctgaactggcagaacgttattcagtagaaaacttagcaacc
ttaaacggctattgccaaatgcgccacgacatagaccccctcgaaagcgattatttagaa
ctgcgtttacgccgttatttaactttcgccgaatttaaatcagaattagcaccgcacttt
ggtcttggtttagaaggctatgccacttggacatcgcccatccgcaaatattcagatatg
gttaatcatcgcttaatcaaagccgtgctggcaaaacagccttatgaaaaaccacaaaat
gacgtgttggcacgtttgcaagaggctcgccgccaaaatcgcctcgtagaacgtgatatt
gccgattggctatattgccgttatcttgcgcctaaagtggctgaaaatgtggaatttaat
gcagaagtgcaagatgtaatgcgtggtggattacgtgtgcaattattagaaaatggtgcc
tcaatgtttatacctgcgtccactttacataataataaagaagaaatgcaggtgaattca
gatgagattgccctttatattaaaggtgaacgcacttacaaaataggcgacatggtaaaa
gtgaaactcacagaagtgaaagaagcaactcgcagtattgtgggcgaaatacttcaataa
DBGET
integrated database retrieval system
