Haemophilus influenzae F3031 (nontypeable): HIBPF_14200
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Entry
HIBPF_14200 CDS
T01395
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hif
Haemophilus influenzae F3031 (nontypeable)
Pathway
hif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HIBPF_14200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hif03019
]
HIBPF_14200
Enzymes [BR:
hif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HIBPF_14200
Messenger RNA biogenesis [BR:
hif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HIBPF_14200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
CBY81500
LinkDB
All DBs
Position
complement(1342311..1343558)
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AA seq
415 aa
AA seq
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MQQDYLSQQRFSDLPLHPIVRDALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTATFHHLLTYQDPNLEYPHPRALILAPTRELAVQISNDAEFLAKACGLKTALAYGG
DGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIALDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPAPQARLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKSTVPPQGHTRHRSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacaacgattctccgatcttcctctacatccgatagta
cgagatgctttggcaaaaaaaggctttgatttttgtaccccaattcaggctttatccttg
cctatcagtttaaatggacgagatgttgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacggctacttttcaccaccttttaacttaccaagatcctaatcttgag
tatcctcacccaagagctttgattttagcacctactcgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagcctgtggattaaagaccgcacttgcctatggtggc
gatggttatgacaaacaactacaagcgattgagcgtggcgtcgatattttgattggtacg
acggggcgagttattgattatgtaaaacaaggcgtaattgctttagatgaaattcaagtt
gtcgtgctagatgaagcggatcgaatgttcgatcttggatttatccgtgatattcgttat
ttattgcgtaaatgccccgctccgcaagcgcgtttaacgatgttattttcagcgacgctt
tcttataaagtgcgtgaattagcatttgaagatatgaatgatcctgaatatattgaaata
gaaccggaacaaaaaacaggtcatcgtattaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgaatggccagagcgttgtattgtg
tttgcgaatacgaaacatcgttgtgaagaaatttggggttatttggctgctgatgggcat
cgtgtcggcttactgactggcgatgtagcacagaaaaaacgtttgtcgttattaaaacaa
tttaccgacggtgatttagatattctagtggcaacagatgtggctgctcgtggtttgcat
atttctgatgtgacgcatgttttcaattatgatttacccgatgatcgagaagattatgtt
caccgaatcggccgtactggacgagcaggggaaagtggcgtttcgattagttttgcttgc
gaagaatatgcgatgaatttaccagcaattgaagaatatattggccattctatcccagtg
agccaatatgaaacagaagccttgcttgaattgccgaaaccatatcgtttaaaaagtacg
gtgccaccgcaagggcatacaagacatcgttcttatcacacaaaataa
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