Haemophilus influenzae Hi375: NF38_04160
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Entry
NF38_04160 CDS
T03485
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hih
Haemophilus influenzae Hi375
Pathway
hih03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF38_04160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hih03400
]
NF38_04160
DNA repair and recombination proteins [BR:
hih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF38_04160
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NF38_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_21
AAA_23
nSTAND3
AAA_25
NACHT
Viral_helicase1
DnaJ_CXXCXGXG
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AIT67428
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Position
810383..813214
Genome browser
AA seq
943 aa
AA seq
DB search
MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PDHNVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHLKILENIAAQGYIRARID
GEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVADMDNP
KAEELIFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI
SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMQGSGKEEIEFQY
MNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARN
VYIGKTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIHERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI
PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN
ALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGQIIATGTPEQVAKVESSHTARFLKPILEKP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatcgatattcgcggggctagaacccataacctgaaaaatattaatttaact
attccacgcaataaacttgtggtgattactgggctttcaggttcgggaaaatcctcttta
gcctttgatacactttatgcggaagggcaacgccgctatgttgaatctctttcggcgtat
gcgcgtcaatttttgtctttaatggaaaagcctgatgtggattctattgaagggctttcc
cctgcaatttccattgaacaaaaatcaacctcacacaatccacgttctacggtgggaaca
attacggaaatttacgattatttacgtttattgtttgcccgagtaggggagccgcgttgt
cccgatcataatgttccattaacggcacaaacaattagtcaaatggtggataaagtatta
agtttgccagaagacagtaagatgatgttacttgcgccagttgtcaaaaatcgaaaaggc
gaacatctcaagattttagaaaatattgctgcgcaaggttatattcgtgcgcgtattgat
ggcgaaatttgcgatttatctgatccgccaaaattagccttacagaaaaagcatactatt
gaagtagtggttgatcgttttaaagtgcggtcagatttagcaacacgtttagccgaatct
tttgaaaccgcattagagctttcaggtggcactgcgattgtggcagatatggataatccg
aaagcggaagaattaattttttcggcaaattttgcttgtccgcattgtggttattctgtg
ccagaattagagcctcgtttgttttcctttaacaatcctgcaggtgcttgcccaacttgt
gatggcttgggtgtgcagcaatattttgatgaagatcgtgtggtgcaaaatccaactatt
tctcttgctggtggtgcggtaaaaggttgggatcgtcgtaatttctattattatcaaatg
cttacatcattggcgaaacattatcattttgatgttgaagccccttatgaatctttgcca
aagaaaattcaacacatcattatgcagggctcaggaaaagaggaaattgaattccaatat
atgaatgatcgtggcgatgtggttattcgcaagcatccttttgaagggattttgaataat
atggctcgccgatataaagaaacggaatcaatgtcggtgcgtgaagaattagcgaaaaat
attagcaatcgaccttgtatagattgtggcggctctcgtttgcgacccgaagcgcgtaat
gtgtatattggaaaaaccaatttgccgataattgcggaaaaaagcattggcgaaaccctc
gaattttttaccgcactttctctcacaggtcaaaaagcacaaattgcggaaaaaattctt
aaagaaatccacgagcgtttgcagtttttagtgaatgtaggtttgaattatctttctctt
tctcgttcagctgaaactctttcaggtggggaagcgcaacgtattcgccttgcgagtcaa
attggtgcgggacttgttggcgtaatgtatgtattagatgaaccctctattggcttgcac
caacgtgataatgaacgcttacttaatacgttaattcatttgcgtaatcttggtaatacg
gtaattgtcgtggaacacgatgaagacgcgattcgtgcagctgaccatattattgatatt
gggcctggtgctggcgtgcatggcggacaagttattgcgcaaggaaatgccgatgaaatt
atgctcaatccaaattccatcacgggaaaatttttatcgggcgcagataaaatcgaaatt
cctaaaaaacgcaccgcacttgataagaaaaaatggctcaaacttaaaggtgcatcaggt
aataacttaaaaaatgtgaatttagatattcccgttggtttgtttacttgcgtaactggt
gtgtctggttcgggaaaatccacacttattaatgacaccttatttccacttgcgcaaaat
gcattaaatagagcggaaaaaaccgattacgcaccttatcaatctattgagggattagaa
catttcgataaagttattgatattaaccaaagcccgattgggcgtacgccacgttcaaat
ccagccacttatacaggcttatttaccccaattcgcgagctttttgcaggggtgccagag
gcacgtgcgcgcggttataatccaggacgttttagctttaacgtgcgaggtggacgctgt
gaagcctgtcagggcgatggtgtactcaaagttgaaatgcactttttacccgatgtttat
gttccttgcgatcaatgtaaaggtaaacgctataatcgcgaaaccttagaaattcgttat
aaaggcaaaaccatccatcaagttttagatatgacggtggaagaagctcgcgagtttttt
gatgcgattccaatgattgcaagaaaattacaaaccttgatggatgtgggattatcctat
attcgattaggtcaatcttccacaacactttcaggcggcgaagcccagcgcgttaagcta
gcgactgagctttctaaacgtgatacaggtaaaaccttatatattttagatgaaccgacg
actggtttgcatttcgctgacattaagcaattacttgaagtactgcatcgattacgcgac
caaggaaatactattgtcgtcattgaacacaatcttgatgtgattaaaaccgcagactgg
attgtcgatcttggcccagagggaggcagtggcggcggacaaattattgcgacgggtaca
ccagagcaagttgccaaagtagaaagttcccacaccgcccgcttccttaaaccgatttta
gaaaaaccttag
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