Haemophilus influenzae Hi375: NF38_04245
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Entry
NF38_04245 CDS
T03485
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hih
Haemophilus influenzae Hi375
Pathway
hih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF38_04245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hih03019
]
NF38_04245
03016 Transfer RNA biogenesis [BR:
hih03016
]
NF38_04245
Enzymes [BR:
hih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NF38_04245
Messenger RNA biogenesis [BR:
hih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NF38_04245
Transfer RNA biogenesis [BR:
hih03016
]
Prokaryotic type
tRNA degradation factors
NF38_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
KH_SLS1_2
S1_2
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AIT67444
UniProt:
A0A2R3FUP4
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All DBs
Position
complement(832178..834307)
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AA seq
709 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVN
PQISPDLVAMIGASAALTLSGVPFNGPIGAARVGFIDNQFVLNPTMAEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHQQQQVVIEAVKEFAKEAGKPRWDWVAPQPNTD
LINKVKAIAEARLGDAYRITEKQARYEQIDAIKADVIAQITAEDEEISESKIVDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGERQDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPSLAEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAI
PAPRADISDYAPRIYTMKIDPKKIKDVIGKGGATIRSLTEETGTSIDIDDDGTVKIAAVD
SNAAKNVMGRIEEIVAEVEAGAIYKGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVNVKVVEIDRQGRIRLTMKDLAPKQETEINQEDPVEEQE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgttaaacaatttaaatacggtcagcataccgttactctagaaactggc
gcgattgcacgtcaagcaacggctgcggttatggcaagcatggacgataccacggtattc
gtgactgttgttgctaaaaaagatgtgaaagaaggtcaagacttcttcccattaaccgta
aactaccaagagcgtacttatgcagcgggtaaaatcccaggtggtttcttcaagcgtgaa
ggtcgtccatctgaaggcgaaactttaattgcacgtttaattgaccgtccaattcgtcca
ttattcccagaaggtttcttcaatgaaatccaagttgtggcaactgtggtttctgtaaac
ccacaaatcagccctgacttagtggcaatgatcggtgcttctgcagcattaaccttatct
ggcgtgcctttcaatggtcctatcggtgcagcgcgtgttggttttatcgacaaccaattc
gtattaaacccaactatggctgaacaaaaacaaagccgtttggacttagtggttgcaggt
actgacaaagccgtattaatggttgaatctgaagctgatattttaactgaagaacaaatg
ttagcggcagtcgtattcggtcatcaacaacaacaagttgtgattgaagcagtcaaagaa
tttgcaaaagaagcgggcaaaccacgttgggattgggttgctccacaaccaaacacagat
ttaatcaacaaagtaaaagcgattgctgaagcacgtttaggcgatgcataccgcattact
gaaaaacaagctcgttacgaacagatcgatgcgattaaagcggatgtaattgcgcaaatc
acagctgaagatgaagaaatcagcgaaagtaaaatcgtggatatttttaccgcacttgaa
agccaaatcgtgcgtggtcgtatcattgcaggcgaaccacgtattgatggtcgtaccgtt
gatactgttcgtgcattagatatttgcactggtgtattaccacgtactcacggttctgcg
atttttactcgtggcgaaacgcaagcattagctgttgcaaccttaggtaccgaacgtgat
gcacaaatcattgatgaattaacgggtgaacgtcaagatcacttcttattccattataat
ttccctccatattctgtaggcgaaacaggtatgatcggctcgccaaaacgtcgtgagatc
ggtcacggtcgtttagcaaaacgtggtgtagcggctgttatgccaagccttgcagaattc
ccgtatgttgtgcgtgtagtatctgaaatcactgaatctaacggttcttcttctatggca
tctgtatgtggtgcgtctttagcattaatggatgcaggcgttccaatcaaagctgctgtt
gcaggtatcgcaatgggtttagtgaaagaagaagagaaattcgtggtgctttcagatatc
ttaggtgatgaagaccatttaggcgatatggactttaaagtagctggtacacgcgaaggt
gtaaccgcccttcaaatggatatcaaaattgaaggtatcacccctgaaattatgcaaatt
gcattaaaccaagcgaaaagtgcacgtatgcacattcttggtgtcatggaacaagcaatc
ccagctccacgtgcggatatttcagattacgcaccgcgcatctatacaatgaaaatcgat
cctaagaaaatcaaagatgtgattggtaaaggtggtgcaacaatccgttcactaactgaa
gaaactggtacatcaattgatattgatgacgatggtacagtgaaaattgctgcagtagat
agcaatgcagcgaaaaacgtaatgggacgtattgaggaaatcgttgcagaagttgaagct
ggcgcaatttacaaaggtaaagtcactcgtcttgctgattttggtgcattcgtcgcaatc
gttggaaataaagaaggtttggttcatatttctcaaattgctgaagagcgtgtagaaaaa
gttagcgattaccttcaagtgggtcaagaggtaaacgtaaaagttgttgaaatcgatcgt
caaggtcgtattcgtttaacaatgaaagacttggctccaaaacaagaaactgaaattaac
caagaagatcctgtcgaagaacaggaataa
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