Haemophilus influenzae Hi375: NF38_07280
Help
Entry
NF38_07280 CDS
T03485
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hih
Haemophilus influenzae Hi375
Pathway
hih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NF38_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hih03400
]
NF38_07280
Enzymes [BR:
hih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NF38_07280
DNA repair and recombination proteins [BR:
hih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF38_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
ResIII
AAA_12
AAA_22
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIT67993
UniProt:
A0A2S9S8L2
LinkDB
All DBs
Position
complement(1487857..1491492)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSRPLNVEEILVV
TFTEMATEELKKKIRERITDAINKLTAFAKTQDKSAFKNDEFLTALCDNLDIFEAIHRLK
LAEQNMDLAAIYTIHGFCRRMLMQYAFHSGIHFNLELIKDQSDLLVRFANEFWREHFYPL
DFESANFIATELVSPAKVLSLLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALN
ELKAFWLESADEILAIITNELEKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKTATPFYSPIFAELEKRVNALMTPDLLSKLT
LYHYRQGLQQKLLDYKLNHQEKSFDDLLRLLCEALQDAQGDELAEMIRFQYPFAMIDEFQ
DTDSQQYAIFSKIYRDNPEKNTGFIMIGDPKQAIYRFRGADIFTYLKASDEAQSRFELTK
NYRSEKHLVDGVNALFDFPQSPFIYQNIKFTAVDSRDDHLRFYLNGKAEPAYRFYLTESD
KVNKTEMAKICAISIQHWLKSAAENQAVFQNEDTRKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFGLNAADIHQIQ
QNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISERLLSQATGERDLTDFLHLAE
ILQQAATLHESESALLSWFEKQIQGEGRQEAQIRLESERQLVKIVTIHKSKGLEYDLVWL
PFLAVPSKDPSKKDINIYYSKERDETLWDIENRNLNALCEETFAEELRLLYVALTRAKYQ
MAFALPAQFDKKWNALHYVLSQGEIGKEINLSNSKDTETLLQAFKEKMRDNVEICTKPNL
EAFPALSINTKNDELKAAEFTGNIEQDWRITSFTSIEQGHRRQNYFAESAEKKHAVFDDA
KDYDSQNAIEISTALLNENESNILDLPRGKQVGTALHRHFENCYFSDLANIEEIDKLRQS
LQLDETFTEPLQNWLQQISHTPLSHEIGIALADLANKDCIKEMPFYLAIWEHFDVEEFNR
TLKAHHHLPSEPLQFEQIQGMVRGSIDLVFRHNGKYYLIDYKSNFLGSTLADYNQEALKK
EMLHSHYDWQYLIYTLALHRYLQSVVPHYDYARDFGGVFYLFLRGMNGEPQSGVFYDRPS
VELITELDGVF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacaatcccactgaatcccatcacgctacctttaaatcaaattagcttaatc
gaagcatctgctggtacgggaaaaacctacactattggttctttatatctccgactttta
ttaaaggcgggagaaaataatttttcacgtccattaaatgtggaagaaattctggtggta
acctttacggaaatggcaacagaagaactcaagaaaaaaattcgtgagcgtataacagat
gcgattaataaactcactgcctttgctaaaacccaagataaatccgcatttaaaaatgat
gaatttcttaccgcactttgtgataatttagatatttttgaggcaattcatcgcttaaag
ttagctgaacaaaatatggatctggcggcgatttataccattcacggtttttgtcgccgt
atgttgatgcaatatgctttccattctggcattcatttcaatttagaattaataaaagat
caatctgatttattagttcgttttgctaatgaattttggcgagagcatttttatccgttg
gattttgaatctgcgaattttatcgcgacagaattagtatcaccagcaaaggtgttgtct
ttgttgaaagcggatttaggtaaagatttgcaggtggagattgaaaataaacaggcgtta
tctgtaccaatacaaatctttttaccgcaatatcttggtggttatcaaaaggcgttgaat
gaattaaaggcattttggttagaaagtgcggatgaaattttagcgattattaccaatgaa
ctggagaaagattatccaaaagatcagttgaaatcgttaaatcgtaaaaagtaccaagta
aagcgtttaggggattggattaataaaatcaatcaatggtcaaataatcctagagattat
caaattaataccacattgaaagactatttcctacaatcatctattgagaaaaattgcgaa
gaatcaacggataaaaataaagataaaaaaaccgcaacgcctttttattccccgattttt
gcagagcttgaaaagcgcgttaatgccttaatgacaccagatttactaagcaaactcact
ctttatcattatcgacaaggcttacaacaaaaacttttagactataaactaaatcatcaa
gaaaaatcctttgatgatttattgcgtttgctttgtgaagccctgcaagatgcgcaaggg
gatgaattagcggaaatgattcgtttccaatatccttttgcgatgattgatgaatttcag
gatacggattcacaacaatacgctattttttcaaaaatttatcgtgataatcccgaaaaa
aatactggttttattatgattggtgatccgaagcaggcgatttatcgtttccgtggcgca
gatatttttacttatctaaaagcctcagacgaagcccaatctcgctttgaactcactaaa
aattatcgttcagagaagcatttggttgatggtgtaaatgctttattcgattttcctcaa
tcgccatttatttatcaaaatattaaatttactgctgttgattctcgtgatgatcatctg
cgattttatttaaatggcaaagccgaaccagcttatcgtttttatctaactgaaagtgac
aaagtgaataaaactgaaatggcaaaaatatgtgctatttctattcaacattggctaaaa
agtgcggctgaaaatcaggcagtttttcaaaatgaagatactcgtaaaacattgcaagcg
gcaaatattgccgtattagtgcgtgataaaaatgaagcggctttagtaaaaaatgaattg
caaaaattagggatcgcgtcagtttatctttctgatcaaaatagcgtatttgatagcaat
gttgcgaaagaattagcttgggtgcttaaagcctgtttgaatgtggcagaacgtccaatt
ttgaacgcgattgcgaccgcactttttggcttaaatgcagcggatattcatcaaattcag
caaaatgaagcagattggcaacgttgggcagatagttttgctcaataccaacaaacttgg
caacgccaaggaatattggcaatgttacatcaaattttattggagcaaggcatttcagaa
cgcttattaagccaagccacgggcgagcgagatttaacggatttcctacatttggcagaa
attttacaacaagctgccacgctacacgaaagtgaatcggcattgctcagttggtttgaa
aaacaaattcaaggcgaaggtcgtcaagaggctcaaattcgtttagaaagtgaacgccag
ttggtaaaaatagtgacaatccataaatctaaaggcttagaatatgatttagtttggcta
ccatttttagctgtgccgagcaaagatccaagtaaaaaagacatcaatatttattattct
aaagaacgagatgaaaccttatgggatatagaaaatcgcaatttaaacgctctttgtgaa
gaaacttttgctgaagaattacgtttactttatgtggctttaacacgtgccaaatatcaa
atggcattcgcgttgcctgcacaatttgataaaaaatggaatgccttacattatgtatta
agccaaggtgaaataggcaaggaaataaatttgtcgaattctaaagataccgagacgttg
ttgcaagcctttaaagaaaaaatgcgagataatgtggaaatctgtactaagccaaatcta
gaggcttttccggctttatctatcaatacaaaaaatgatgagcttaaagccgcagaattt
acgggcaatattgagcaagattggcgaataaccagttttacttcaattgaacaaggtcat
cgccgacaaaattatttcgctgaaagtgcggagaaaaaacacgctgtttttgatgacgca
aaagattacgatagtcaaaatgctattgaaatatccaccgcacttttaaacgaaaatgaa
tcaaatattttagatttaccacgaggtaaacaagtcgggactgcattgcatcgccatttt
gaaaattgctatttttctgatttagcaaatatagaagaaattgacaaattaagacaatcc
ttacagttagatgaaacttttacagagccgctacaaaattggctacaacagatttcacat
acgccactttctcatgaaataggaatagcattagctgatttggcaaataaagattgcatt
aaagaaatgccattttatctggctatttgggaacattttgatgttgaagagtttaatcgc
acattgaaagcccatcatcatttaccaagcgagccacttcaatttgagcaaattcaagga
atggtgagaggttcaattgacttagttttccgccataatggaaaatattatcttattgat
tataaatctaatttcttaggttcaacccttgctgactacaatcaagaggcattgaaaaaa
gaaatgttacacagtcactatgattggcaatatttaatttatacgctggcattacatcgt
tatttacaaagcgttgtgcctcattacgattatgcacgagatttcggcggggtattttat
cttttcttacgtggaatgaacggtgaaccacaatctggcgtattttacgatcgtccaagc
gttgaattaatcacagaattagacggggtgttttaa
DBGET
integrated database retrieval system
