Haemophilus influenzae Hi375: NF38_08075
Help
Entry
NF38_08075 CDS
T03485
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hih
Haemophilus influenzae Hi375
Pathway
hih03410
Base excision repair
hih03430
Mismatch repair
hih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF38_08075
03430 Mismatch repair
NF38_08075
03440 Homologous recombination
NF38_08075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hih03400
]
NF38_08075
DNA repair and recombination proteins [BR:
hih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NF38_08075
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NF38_08075
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NF38_08075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIT68139
LinkDB
All DBs
Position
complement(1648774..1650501)
Genome browser
AA seq
575 aa
AA seq
DB search
MKKLIKRREIPVGNSVSNHPLLDRLYRARHIKNTKELDRTLKSMLNPNQLYGIDQAVNLL
VEAYQQQQKIVIVGDFDADGATSTALSVLALRQLGFSDVDYLVPNRFEQGYGLSIPVAEM
ALEKGVQLLMTVDNGVSSFEGIAFLKEKGIRVLVTDHHLPPETLPPADAIVNPNLSQCHF
PSKSLAGVGVAFYLMLAVRAKFRELGIFTAETQPNFTDLLDLVALGTVADVVPLDQNNRI
LAYQGLMRIRARRCRPGIIALAEVANRNVEQFTSSDLGFCIGPRLNAAGRLDNMSIGVEL
LLANEMSKARELALDLDELNQTRKEIEAGMKLEAIKICQNLTALFKELPYGITLYQPDWH
QGVLGIVSSRVKDQYHRPVIAFTQDSEGILKGSARSIEGLHMRDVLERIHSQHPNIILKF
GGHAMAAGLSIREEYFADFQHLFNQTVADWFDEEHLQGVIWTDGELNSNEFNLETAELIK
SVGTWGQGFPEPCFDGEFKILDQRAIGQNKNHLKMLLEPKQGGGLLDAIAFNINTRLYPD
LSIKQARLAYKLDINEFRGNRSLQLLVDYIEPIDE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaacttatcaaacgccgtgaaattccagttggaaattctgtttcaaaccatccg
ttattagatcgcctttatcgcgctcgtcatattaaaaacaccaaagaattagaccgcact
ttgaaatcaatgctcaatccaaatcaattatatggcattgatcaagcggtaaatttatta
gttgaagcctatcaacaacagcaaaaaatagtgattgttggggattttgatgcagatggt
gcaaccagcacagcattgagtgtgctggctttaagacaacttggtttttccgatgtagat
taccttgtaccaaatcgatttgaacaaggttatggtttgagtattcctgtggctgaaatg
gctcttgaaaagggcgttcagcttttaatgacggtggataacggcgtttcatcttttgaa
ggcattgcatttttgaaagaaaaaggcattcgagttttagtcacggatcatcatttaccg
cccgaaactttgccgccagccgatgcgattgttaatcctaatttaagtcagtgtcatttc
ccttcaaaatctttagcaggcgttggtgtggcattttatttgatgttggcggtgcgtgca
aaatttcgtgaactcggtatttttactgcagaaacacaacctaattttactgatttgctc
gatctagtggcattgggtactgtcgctgatgtggtacctttagatcaaaataatcgtatc
cttgcttatcaaggtttaatgcggattcgtgcacggcgttgtcgtcctggtattattgcg
ttggctgaagtggctaaccgtaatgttgagcaatttacctcaagtgatctcggtttttgt
atcgggcctcgtttaaatgcggcagggcgtttagataatatgtcgattggggtggagctt
ttgctggcgaacgaaatgtcaaaagccagagaattagctttagatctcgacgaactcaat
caaacgcgtaaagaaattgaagcgggtatgaaacttgaggcaataaaaatttgtcaaaat
cttaccgcactttttaaagagttaccctatggtattacgctttatcagcccgattggcat
caaggcgtattaggcattgtttcatcaagggttaaggatcaatatcatcgtccagtgatt
gcctttacgcaagatagtgagggaattttgaaaggttccgctcgttctattgaggggtta
catatgcgcgatgttttagagcgtattcattcgcaacatcctaatataattttaaaattt
ggcggacacgcaatggctgctgggttgagtattcgagaagaatattttgccgatttccaa
catctttttaatcaaaccgttgccgattggtttgatgaagaacatctacaaggcgtaatt
tggacagatggcgaactaaattcaaatgaatttaatcttgaaacggcagagctgataaaa
tcggtaggcacttgggggcaagggtttcctgagccttgctttgatggagaatttaaaatt
ttagaccagcgtgcaattgggcaaaataaaaatcatctaaaaatgttgctagaaccgaaa
cagggcgggggtttattagatgccattgcgtttaatattaatacaagattgtatcctgat
ctttcaattaaacaggctcgtttagcctataaattagatattaacgaatttcgtggcaat
cgtagcctacaattattggtagattatattgagccgatagatgagtga
DBGET
integrated database retrieval system
