Haemophilus influenzae Hi375: NF38_08760
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Entry
NF38_08760 CDS
T03485
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
hih
Haemophilus influenzae Hi375
Brite
KEGG Orthology (KO) [BR:
hih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hih03019
]
NF38_08760
Enzymes [BR:
hih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NF38_08760
Messenger RNA biogenesis [BR:
hih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NF38_08760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
T2SSE
ResIII
nSTAND3
AAA_30
WHD_HA2
NACHT
AAA_25
nSTAND_NTPase5
DUF6145
Fis1_TPR_N
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AIT68273
LinkDB
All DBs
Position
1788317..1792228
Genome browser
AA seq
1303 aa
AA seq
DB search
MKNSSVKHTLTPLQQSLFSQLNDIMRVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIE
QARLRVEQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMC
LELGFGNLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMT
DGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRDLKLIITSATIDV
ERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAESRGDILIFM
NGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTV
PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF
NSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFEM
VRTKAGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQ
EKQQASDEKHRRFADKKSDFLAFLNLWYYLQEQQKALSKNQFRRQCQKDFLNYLRIREWQ
DIYHQIRLTVREMGLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIF
PNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSEPRWSKSRGA
VIADEKVTLYGVPIVAARPVNYGAIDPTVSREIFIQSALVEGGWNTKHKFFKENQRLVQE
VEELEHKSRRRDILVDDRTLFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFERSFL
INDDAEQVSKLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQI
PGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGVTV
EAEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKFNLKDRVQESISAVADDGIEQS
RLHIWSFADLPQCYEQKQRGFSVKAFPAIVDEKDAVGIKLFETEFEQSVAMQQGLRRLLL
LNVPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGFE
KLRDFVRENLNEVTVDIAQKVEQILTLTYQLNQHLKGKMDFTMAFALSDIKSQLASLVYQ
GFVQKSGYDRLPDLQRYLQAIDKRIDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSK
PISDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIANIISQY
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagctcggtaaaacacacattaactcccttacaacaatctcttttttctcaa
ttaaatgacatcatgcgggtggatcaacgtcgcttatccgcccgcattcatggtattgga
aaaattaaaagccaagaggctcaacaagccgttgccgctgaaatccaacagcaaattgaa
caagctagattacgtgtagaacaacggaaaagtgcggtacaaaatccgattgtttttcca
gagagtttgcccgttagccaacgcaaagtcgaaattcaaaaactgatttctgaacatcag
gtcatcgtggtggcaggggaaactggttcaggtaaaaccacccaattgccgaaaatgtgt
ttggaattaggtttcggcaatttaggcatgattggtcatactcaaccacgccgtattgct
gctcgttcggtggcggcgcgtattgcggaagaactggaaacggagcttggcggtttagtt
ggttataaggttcgttttaacgatcaaatcagcgataacacccaaatcaaattgatgact
gacgggattctgctagcagaaattcaaaacgatcgttttctcaatcaatattcttgtttg
attatcgatgaagcccacgaacgtagcctaaataacgattttattctcggttatctgaaa
cagttgttgccacgtcgtcgtgatttaaaacttattatcacttctgcaaccattgatgtg
gaacgcttttctaaacattttaataatgcaccgatcattgaagtctcaggcagaacctat
cctgttgaagtgcgttatcgtcccgtagtggaggaagacgatcaagatcagctacaaggt
attcttaatgcggtggatgaattgcaagcagaaagtcgaggcgatatcttgatctttatg
aatggagagcgtgaaattcgtgatactgccgaagccttgcaaaagcaaaatctaaaacac
acggaaattctaccgctctttgcacgcttgtctgcgcaagaacaaaataaaattttccat
ccaagtggcttaaatcgcattgtattagcgaccaacgtcgcagaaacctcattgaccgtg
ccgggcattaaatatgtgattgacccaggtactgcgcgcatttcccgttatagctatcgc
accaaagtacaacgtttaccgattgaacctatttcacaggcatctgcaaatcagcgtaaa
ggtcgatgtggtcgtgtaagtgaagggatttgtattcgtttatattcggaagaggatttt
aattctcgtccagagtttaccgatcctgaaattctacgcaccaatttagcctccgttatt
ttgcaaatgacggcattgggtttggatgatattgaagcgttcccatttgttgatgcgcca
gataaacgccatattcaagatgggataaaactgttggaagaattgggcgcgtttgaaatg
gttcgcaccaaagcgggtgaaaaacgcctattaactagagttggtcgccaactcgctcaa
cttccagtcgatccgcgccttgccaaaatgatcctaagtgcggtcaattttggctgcgtt
tatgaaatgatgatcatcgtctctgcgttatccattcaagatccgcgcgaacgaccacaa
gaaaaacagcaagcttctgatgaaaaacatcgtcgttttgccgataaaaaatcagatttc
ttggctttcctcaatctttggtattatctacaagaacaacaaaaagcattgagtaaaaac
caattccgtcgtcagtgccaaaaggatttcttaaattatttacgcattcgtgaatggcag
gatatttatcatcaaattcgtttaaccgtgcgtgaaatgggcttaccgattaattccgaa
aaagcagaatatcagcaaattcataccgcacttttaagcggtttgctttctcatatcggt
ttaaaagaagcggagaaacaacaatatcttggcgcacgtaatgcccattttgcaattttc
cccaattctgtgcttttcaaaaaacaaccgaaatgggtgatggcggcagagttagtggaa
acctccaaactttgggggcgcatggtggcagaaatcgagccagaatggattgagccactt
gccgagcatctcattaaaaaatcctattcagaaccgcgttggtcgaaatcccgtggcgct
gtgattgcagatgagaaagtcacgctttacggtgtgccgattgtggctgcgagaccagtg
aattacggagctattgatccaacggtaagccgtgagatttttattcaatctgccttggtg
gaagggggttggaataccaagcataaattcttcaaagaaaatcaaaggctcgttcaagaa
gtagaagaattggaacacaaaagccgccgccgcgatattttggtggatgatcgcacattg
tttgaattttacgatcagcgtattggcacagaagttgtctctcaaaaacattttgatacc
tggtggaaaaaggcacagcaaaaagatcctgaattgcttaattttgaacgttcatttttg
atcaatgatgatgcggaacaagtgagcaagctggatttcccgaatttctggcatcaaggt
aatttaaaactcaaattgacttatcaatttgaaccaggtaccgatgcggacggcgtgaca
gtacatattccattgccattgctcaaccaagtggaaatgacaggctttgactggcagatt
ccaggcttgcgtgaagaattggtgattgcgctgattaaatctctgccgaaatcttatcgc
cgtaacttcgtgcctgcacctaattatgctcaagcttttttaagtcgtgcggtgccgttg
gaaaagccattattagatacgctgatttatgaattgcgtcgtatgactggcgtcaccgta
gaagcggaacattggaattgggaacaaattccaagccatctgaaaatgacgttccgtgtg
gtggatgaaaacggtaagaaaatcgcagaatccatgaatttggatgagctgaaattcaac
ttaaaagatcgtgtgcaggaaagtatttctgctgtggcagatgatggcattgagcaaagc
aggctgcatatttggagctttgcagatttaccacaatgttatgaacaaaaacaacgtggt
ttcagcgtcaaagcgttcccagctattgtagatgaaaaagatgcggtgggtatcaaactg
tttgaaacagagtttgagcaatcggtggcgatgcaacaaggtttacgtcgtttgttattg
ctcaatgtgccatcaccaattaaatatcttcatgaaaaattgccgaataaggctaaattg
ggtctgtattttactccgttcggtcgcgtattggatttgatcgatgactgtattgcttgt
gccgtagataagctaattgccgattttggcggttttgtgtgggatgaagcaggctttgaa
aaattgcgtgatttcgttcgagaaaatcttaacgaagtgaccgtggatattgcgcagaaa
gtggagcagattcttactctcacttaccaacttaaccaacaccttaaaggcaaaatggat
ttcacgatggcatttgcattatccgacatcaaatcgcaacttgcaagtttggtgtatcaa
ggttttgtgcaaaagagcggttatgatcgcctaccagatttacaacgttatctgcaagcc
attgataaacgtattgataagttggctcaagatgtaaaccgtgatcgtgccgcgatgcta
cgcgtggaacaagtgcaacaggcttaccaacaattgctcgctaaactgccaaaatctaaa
ccgatttcggatgaggtggcggagattcgatatatgatcgaggaattgcgtgtgagtttg
tttgcccagcagttggggacgaaatatcaaatatcagataaaagaatagcaaatattatt
agtcaatactaa
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