Haemophilus influenzae KR494 (serotype f): HifGL_000023
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Entry
HifGL_000023 CDS
T02839
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Pathway
hik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HifGL_000023 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hik03400
]
HifGL_000023 (uvrA)
DNA repair and recombination proteins [BR:
hik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HifGL_000023 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HifGL_000023 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_21
nSTAND3
AAA_25
AAA_23
NACHT
Viral_helicase1
DnaJ_CXXCXGXG
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AGV10860
LinkDB
All DBs
Position
22263..25094
Genome browser
AA seq
943 aa
AA seq
DB search
MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PDHNVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHLKILENIAAQGYIRARID
GEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNP
KAEELIFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI
SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMQGSGKEEIEFQY
MNDRGDVIIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARN
VYIGKTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI
PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN
TLNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGQIIATGTPEQVAKVESSHTARFLKPILEKP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattgatattcgcggggctagaacccataatctgaaaaatattaatttaacc
attccacgcaataaacttgtggtgatcacagggctttcaggttcggggaaatcttcttta
gcctttgatacgctttatgcggaagggcaacgccgttatgttgaatccctttctgcttat
gcgcgtcagtttttatctttaatggaaaagcctgatgtggattctattgaggggctttcc
cctgcaatttccattgaacaaaaatccacctcacacaatccacgttctacagtgggaaca
attacggaaatttacgattatttacgtttattgtttgcccgtgtaggggagccgcgttgt
cccgatcacaacgttccattaacggcacaaacgattagtcaaatggtggataaagtatta
agtttgccagaagacagcaaaatgatgttacttgcgccagtggtcaaaaatcgcaaaggc
gaacatctcaagattttagaaaatattgctgcgcaaggttatattcgtgcgcgtattgat
ggcgaaatttgcgatttatctgatccgccaaaattagctttacagaaaaaacatacaatt
gaagtggtggtggatcgctttaaagtgcggtcagatttagcaacacgtttagccgaatct
tttgaaactgcattagagctttcaggtggcaccgcaattgtggcagaaatggataatccg
aaagcggaagaattaattttttcggcaaattttgcttgtccgcattgtggttattctgtg
ccagaattagagcctcgtttgttttcctttaacaatcctgcaggtgcttgcccaacttgt
gatggcttgggtgtgcagcaatattttgatgaagatcgtgtggtgcaaaatccaacgatt
tcccttgcaggcggtgcagtgaaaggttgggatcgtcgtaatttctattattatcaaatg
cttacatcattggcgaaacattatcattttgatgttgaagccccttatgaatctttgcca
aagaaaattcaacacatcattatgcagggttcaggcaaagaggaaattgaattccaatat
atgaatgatcgtggcgatgtgattattcgcaagcacccttttgaagggattttgaataat
atggctcgccgatataaagaaacggaatcaatgtcggtgcgtgaagaattagcaaaaaat
attagcaatcgaccttgtatagattgtggcggttctcgtttacgacccgaagcgcgcaat
gtgtatattggaaaaaccaatttgccgataattgcggaaaaaagcattggcgaaaccctc
gaattttttaccgcactttctttaactgggcaaaaagcacaaattgcggaaaaaattctt
aaagaaatccgcgagcgtttgcagtttttagtcaatgttgggttgaattatctttctctt
tctcgttctgcggaaaccctttcaggcggtgaggcgcaacgtattcgccttgccagtcaa
attggtgcgggacttgttggcgttatgtatgtattagatgaaccctctattggcttgcac
caacgtgataatgaacgcttacttaatacattaattcatctacgtaatcttggtaatacg
gtaattgtcgtagaacacgatgaagacgcaattcgtgcggctgatcatattattgatatt
gggcctggtgctggcgtacacggcggacaagttattgcacaaggaaatgccgatgaaatc
atgctcaatccaaattccatcacaggaaaattcttatcgggtgcagataaaatcgaaatc
ccgaaaaaacgcaccgcacttgataagaaaaaatggctcaaacttaaaggcgcatcaggt
aataacttaaaaaatgtgaatttagatattcccgttggtttatttacttgcgtgactggt
gtatctggttcgggaaaatccacacttattaatgacaccttatttccacttgcgcaaaat
acgttaaatagagcagaaaagacggattacgcaccttatcaatctatcgagggattagag
catttcgataaagttatcgacattaatcaaagcccgattggacgcacgccacgttcaaat
ccagccacttatacaggcttatttaccccaattcgtgaactttttgctggcgtaccagaa
gcgcgtgcgcgcggttataatccaggacgttttagctttaacgtacgaggtggacgctgt
gaagcctgtcaaggcgacggtgtactcaaagttgaaatgcactttttgcccgatgtttat
gttccttgcgaccaatgtaaaggtaaacgctataatcgcgaaaccttagaaattcgttac
aaaggtaaaaccatccatcaagttttagatatgacagtggaagaagcacgcgagtttttt
gatgcgattccaatgattgcaagaaaattacaaaccttgatggatgtgggattatcctat
attcgattaggtcaatcttccacaacactttcaggcggcgaagcacaacgcgttaagcta
gcgaccgagctttctaaacgtgatacgggtaaaaccttgtatattctagatgaaccgacg
actggtttgcatttcgctgacattaagcaattacttgaggtgttgcatcgattacgcgat
caaggaaatactattgtcgtgatagaacacaatcttgatgtgattaaaaccgcagactgg
attgtcgatcttggcccagagggaggcagtggcggcggacaaattattgcgacgggtaca
ccagagcaagttgccaaagtagaaagttcccacaccgctcgcttccttaaaccgatttta
gaaaaaccttag
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